RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 KRT17Q04695 432 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 MRPL58Q14197 206 aaKnown RBP8.73□□□□□ -1.01
FDPS-209ENST00000471117 PPP2R5EQ16537 467 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 CCDC142Q17RM4 750 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 LRRC38Q5VT99 294 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 KIAA1841Q6NSI8 718 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 FAM171BQ6P995 826 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 TMCO3Q6UWJ1 677 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 C4orf50Q6ZRC1 276 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 PAQR9Q6ZVX9 377 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 DDX53Q86TM3 631 aaKnown RBP8.73□□□□□ -1.01
FDPS-209ENST00000471117 TMEM173Q86WV6 379 aaPredicted RBP8.73□□□□□ -1.01
FDPS-209ENST00000471117 KATNAL2Q8IYT4 538 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 KDF1Q8NAX2 398 aaPredicted RBP8.73□□□□□ -1.01
FDPS-209ENST00000471117 OR10T2Q8NGX3 314 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 SPPL3Q8TCT6 385 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 CLP1Q92989 425 aaKnown RBP8.73□□□□□ -1.01
FDPS-209ENST00000471117 HSFY1Q96LI6 401 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 HERC2P3Q9BVR0 1158 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 DUSP16Q9BY84 665 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 B3GNT5Q9BYG0 378 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 DDX47Q9H0S4 455 aaKnown RBP8.73□□□□□ -1.01
FDPS-209ENST00000471117 POMKQ9H5K3 350 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 CRTAC1Q9NQ79 661 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 CYLDQ9NQC7 956 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 RWDD3Q9Y3V2 267 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 TEP1Q99973 2627 aaKnown RBP8.73□□□□□ -1.01
FDPS-209ENST00000471117 SDK1Q7Z5N4 2213 aa8.73□□□□□ -1.01
FDPS-209ENST00000471117 ITPR1Q14643 2758 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 TCRBV7S2A1N4TA0A589 114 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 C2CD4BA6NLJ0 364 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 FSCN2O14926 492 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 XPO1O14980 1071 aaKnown RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 RAD51CO43502 376 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ERLIN1O75477 346 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 GRAP2O75791 330 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 AP1G2O75843 785 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 SEC31AO94979 1220 aaKnown RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 HEXIM1O94992 359 aaKnown RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 ZRANB2O95218 330 aaKnown RBP eCLIP8.72□□□□□ -1.017e-7■■□□□ 11.4
FDPS-209ENST00000471117 EFEMP2O95967 443 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 RARAP10276 462 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 LCP1P13796 627 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 PDGFRAP16234 1089 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 GPD1P21695 349 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 RPL34P49207 117 aaKnown RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 GLUD2P49448 558 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ZNF143P52747 638 aaPredicted RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 SPEM2Q0P670 501 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 LLGL1Q15334 1064 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 PSMD5Q16401 504 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 NFE2Q16621 373 aaPredicted RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 ATP13A4Q4VNC1 1196 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 SLC39A12Q504Y0 691 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 RTP2Q5QGT7 225 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ZFYVE27Q5T4F4 411 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 TRNP1Q6NT89 227 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ANKRD54Q6NXT1 300 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 SYCE2Q6PIF2 218 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 OLFML1Q6UWY5 402 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 CCNI2Q6ZMN8 369 aaPredicted RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 TAS1R1Q7RTX1 841 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 MTERF4Q7Z6M4 381 aaKnown RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 FAM35AQ86V20 835 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 SPATA2LQ8IUW3 424 aaPredicted RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 SCUBE3Q8IX30 993 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 RNF168Q8IYW5 571 aaPredicted RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 RCOR2Q8IZ40 523 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ZDHHC14Q8IZN3 488 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ARFGAP1Q8N6T3 406 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 PRELID2Q8N945 189 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 EXD1Q8NHP7 514 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 CCDC26Q8TAB7 109 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 NETO1Q8TDF5 533 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 MICAL1Q8TDZ2 1067 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 POF1BQ8WVV4 589 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 RXFP2Q8WXD0 754 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 PIK3R5Q8WYR1 880 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 MYLPFQ96A32 169 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 MAGOHBQ96A72 148 aaKnown RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 SMARCD1Q96GM5 515 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 PCED1BQ96HM7 432 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 PIWIL1Q96J94 861 aaKnown RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 B3GALT6Q96L58 329 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 PKMYT1Q99640 499 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 CNPY3Q9BT09 278 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 VN1R3Q9BXE9 311 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ZCWPW1Q9H0M4 648 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 PLEKHA4Q9H4M7 779 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 SLITRK6Q9H5Y7 841 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ARFGAP3Q9NP61 516 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 CHST7Q9NS84 486 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 KRT82Q9NSB4 513 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ASNSD1Q9NWL6 643 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 ZNF446Q9NWS9 450 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 STIM2Q9P246 746 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 SMG5Q9UPR3 1016 aaKnown RBP8.72□□□□□ -1.01
FDPS-209ENST00000471117 PATJQ8NI35 1801 aa8.72□□□□□ -1.01
FDPS-209ENST00000471117 DPYSL4O14531 572 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms