RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 ZNF33AQ06730 810 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 DSC1Q08554 894 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 MMRN1Q13201 1228 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 SEMA3BQ13214 749 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 EIF4EBP2Q13542 120 aaPredicted RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 PAFAH1B3Q15102 231 aaKnown RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 CA9Q16790 459 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 KLHL38Q2WGJ6 581 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 CCDC38Q502W7 563 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 MDH1BQ5I0G3 518 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 OTUD1Q5VV17 481 aaPredicted RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 LHX8Q68G74 356 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 MICALCLQ6ZW33 695 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 PDZD4Q76G19 769 aaPredicted RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 THEM5Q8N1Q8 247 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 FAM71DQ8N9W8 422 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 C3orf58Q8NDZ4 430 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ZMIZ2Q8NF64 920 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 CLEC4CQ8WTT0 213 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 PYROXD1Q8WU10 500 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ATXN2LQ8WWM7 1075 aaKnown RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 APBB2Q92870 758 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ARHGEF2Q92974 986 aaKnown RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 CAPNS2Q96L46 248 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ZNF317Q96PQ6 595 aaPredicted RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 QKIQ96PU8 341 aaKnown RBP eCLIP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 XPO6Q96QU8 1125 aaKnown RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 KCTD15Q96SI1 283 aaPredicted RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 LPIN3Q9BQK8 851 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 FERMT1Q9BQL6 677 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 RTP3Q9BQQ7 232 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ADAM33Q9BZ11 813 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 KLC2Q9H0B6 622 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 ACSS3Q9H6R3 686 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 KRT82Q9NSB4 513 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 SAE1Q9UBE0 346 aaPredicted RBP7.9□□□□□ -1.14
COL6A3-208ENST00000468792 PHF24Q9UPV7 400 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 NAALADL1Q9UQQ1 740 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 NOD1Q9Y239 953 aa7.9□□□□□ -1.14
COL6A3-208ENST00000468792 HTTP42858 3142 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 CLUHO75153 1309 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 EXOC1LA0A1B0GW35 172 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 H7C0C1 242 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 PIK3R2O00459 728 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 SYN3O14994 580 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 BEST1O76090 585 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 B3GAT3O94766 335 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 IGLV3-25P01717 112 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 LTFP02788 710 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 CHN1P15882 459 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ACAT1P24752 427 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 GCAP28676 217 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 FDFT1P37268 417 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ATP5OP48047 213 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 CXCR3P49682 368 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 SULT1E1P49888 294 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 CDK7P50613 346 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 AFF1P51825 1210 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 MAP3K7CLP57077 242 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 GEMIN4P57678 1058 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 CAP1Q01518 475 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 TSPY1Q01534 308 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 PDIA2Q13087 525 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 SEMA5AQ13591 1074 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 DPYSQ14117 519 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 PDK1Q15118 436 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 LONRF1Q17RB8 773 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ARL13BQ3SXY8 428 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 RAB6CQ53S08 254 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 DCAF6Q58WW2 860 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 UBAP2Q5T6F2 1119 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 NCBP2-AS2Q69YL0 99 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ZNF449Q6P9G9 518 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ADGRD1Q6QNK2 874 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 GLB1LQ6UWU2 654 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 C4orf50Q6ZRC1 276 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ARHGEF18Q6ZSZ5 1173 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 BHLHA9Q7RTU4 235 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 CCNJLQ8IV13 435 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ZBED8Q8IZ13 594 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 RAET1EQ8TD07 263 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ZNF473Q8WTR7 871 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 LPPQ93052 612 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 FAM149B1Q96BN6 582 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ALKBH8Q96BT7 664 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 CHMP6Q96FZ7 201 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 SGSM3Q96HU1 749 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 FUBP3Q96I24 572 aaKnown RBP eCLIP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 C9orf72Q96LT7 481 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 MED10Q9BTT4 135 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 OXCT2Q9BYC2 517 aaPredicted RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 ULBP1Q9BZM6 244 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 RAB6CQ9H0N0 254 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 OSBPL2Q9H1P3 480 aa7.89□□□□□ -1.15
COL6A3-208ENST00000468792 DHX35Q9H5Z1 703 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 XAB2Q9HCS7 855 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 WDR6Q9NNW5 1121 aaKnown RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 HMX1Q9NP08 348 aaPredicted RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 DMAP1Q9NPF5 467 aaPredicted RBP7.89□□□□□ -1.15
COL6A3-208ENST00000468792 EIF2B3Q9NR50 452 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms