RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 MYO18AQ92614 2054 aaKnown RBP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 GTPBP10A4D1E9 387 aaKnown RBP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 K7ESF4 209 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 RNF225M0QZC1 329 aaPredicted RBP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 SCAMP3O14828 347 aaKnown RBP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 HOXA6P31267 233 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 TKTL1P51854 596 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 CNGA2Q16280 664 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 RHBDF2Q6PJF5 856 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 ENOSF1Q7L5Y1 443 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 FAM114A1Q8IWE2 563 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 BBS7Q8IWZ6 715 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 CCDC26Q8TAB7 109 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 KCTD13Q8WZ19 329 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 TFAP2BQ92481 460 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 KREMEN1Q96MU8 473 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 L2HGDHQ9H9P8 463 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 LRRC4Q9HBW1 653 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 TAB2Q9NYJ8 693 aa15.17■□□□□ 0.02
COL27A1-203ENST00000468565 LSM7Q9UK45 103 aaKnown RBP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL27A1-203ENST00000468565 PTPRZ1P23471 2315 aaPredicted RBP15.16■□□□□ 0.02
COL27A1-203ENST00000468565 TULP2O00295 520 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 GREM1O60565 184 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 MFAP3LO75121 409 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 RNF40O75150 1001 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 IRF1P10914 325 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 ADH5P11766 374 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 EEF1GP26641 437 aaKnown RBP15.16■□□□□ 0.02
COL27A1-203ENST00000468565 GAD2Q05329 585 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 C10orf120Q5SQS8 335 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 SMYD5Q6GMV2 418 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 CREBRFQ8IUR6 639 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 SCML4Q8N228 414 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 UBA3Q8TBC4 463 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 EZH1Q92800 747 aaPredicted RBP15.16■□□□□ 0.02
COL27A1-203ENST00000468565 WBP2Q969T9 261 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 VPS16Q9H269 839 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 DNAI1Q9UI46 699 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 OTOGLQ3ZCN5 2332 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 SPAG17Q6Q759 2223 aa15.16■□□□□ 0.02
COL27A1-203ENST00000468565 ZBED1O96006 694 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 CCDC175P0C221 793 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 YWHAGP61981 247 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL27A1-203ENST00000468565 LY6G5CQ5SRR4 150 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 PKN3Q6P5Z2 889 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 TRIM65Q6PJ69 517 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 GBP6Q6ZN66 633 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 SUMF1Q8NBK3 374 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 CPLX3Q8WVH0 158 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 ZSWIM1Q9BR11 485 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 ULBP1Q9BZM6 244 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 EPC1Q9H2F5 836 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 C2orf42Q9NWW7 574 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.15■□□□□ 0.02
COL27A1-203ENST00000468565 MDM4O15151 490 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 HOXC11O43248 304 aaPredicted RBP15.15■□□□□ 0.02
COL27A1-203ENST00000468565 BRD2P25440 801 aaKnown RBP15.15■□□□□ 0.02
COL27A1-203ENST00000468565 MTIF2P46199 727 aaKnown RBP15.15■□□□□ 0.02
COL27A1-203ENST00000468565 ADIGQ0VDE8 80 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 MAN2A1Q16706 1144 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 BHLHA9Q7RTU4 235 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 SLC35F5Q8WV83 523 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 PNKPQ96T60 521 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 UBE2TQ9NPD8 197 aaPredicted RBP15.15■□□□□ 0.02
COL27A1-203ENST00000468565 CNGB3Q9NQW8 809 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 SPHK2Q9NRA0 654 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 NUDT5Q9UKK9 219 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 PRDM4Q9UKN5 801 aa15.15■□□□□ 0.02
COL27A1-203ENST00000468565 CASP14P31944 242 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 MFAP3P55082 362 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 COG7P83436 770 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 Q6ZNB5 142 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 TOGARAM2Q6ZUX3 1019 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 LONP2Q86WA8 852 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 SIX6OS1Q8N1H7 587 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 SECISBP2LQ93073 1101 aaKnown RBP15.14■□□□□ 0.01
COL27A1-203ENST00000468565 ACDQ96AP0 544 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 CRACR2AQ9BSW2 395 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 APEX2Q9UBZ4 518 aa15.14■□□□□ 0.01
COL27A1-203ENST00000468565 A0A0A0MRY4 1105 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 K7EQS6 105 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 M0QYV0 167 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 STC2O76061 302 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 GYPCP04921 128 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 SLC9A1P19634 815 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 CNR2P34972 360 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 UBXN1Q04323 297 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 MEA1Q16626 185 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 EXOC3L4Q17RC7 722 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 BTBD8Q5XKL5 378 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 SYT13Q7L8C5 426 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 C12orf40Q86WS4 652 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 ETFBKMTQ8IXQ9 262 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 RPLP0P6Q8NHW5 317 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 HSFY1Q96LI6 401 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 OLA1Q9NTK5 396 aaKnown RBP15.13■□□□□ 0.01
COL27A1-203ENST00000468565 MARK1Q9P0L2 795 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 RASAL2Q9UJF2 1139 aa15.13■□□□□ 0.01
COL27A1-203ENST00000468565 SLC8A2Q9UPR5 921 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms