RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 RHOP08100 348 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 RARGP13631 454 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 PTPN2P17706 415 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 CCR2P41597 374 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 SLC25A52Q3SY17 297 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 RAB6CQ53S08 254 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 HABP4Q5JVS0 413 aaKnown RBP7.16□□□□□ -1.26
SCAF4-204ENST00000467731 TMEM184AQ6ZMB5 413 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 GRASPQ7Z6J2 395 aaPredicted RBP7.16□□□□□ -1.26
SCAF4-204ENST00000467731 ARHGAP18Q8N392 663 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 LRRC57Q8N9N7 239 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 TRIM58Q8NG06 486 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 ADAM32Q8TC27 787 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 NT5C3BQ969T7 300 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 ALS2CR12Q96Q35 445 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 APOL5Q9BWW9 433 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 RAB6CQ9H0N0 254 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 CCSER2Q9H7U1 834 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 IRAK4Q9NWZ3 460 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 FAM53CQ9NYF3 392 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 CLIC5Q9NZA1 410 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 TRPM5Q9NZQ8 1165 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 IP6K2Q9UHH9 426 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 STAP1Q9ULZ2 295 aa7.16□□□□□ -1.26
SCAF4-204ENST00000467731 SYNJ2BP-COX16A0A087WUM0 186 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 A0A1W2PRU2 124 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 TLR5O60602 858 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 TBX10O75333 385 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 PROSCO94903 275 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 MYL4P12829 197 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 GJA1P17302 382 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 SULT1E1P49888 294 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 ATXN1P54253 815 aaKnown RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 NTHL1P78549 312 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 CYP4F8P98187 520 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 DLX2Q07687 328 aaPredicted RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 ADAM15Q13444 863 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 PIGHQ14442 188 aaPredicted RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 ZNF569Q5MCW4 686 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 RARS2Q5T160 578 aaKnown RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 OTUD1Q5VV17 481 aaPredicted RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 SNX30Q5VWJ9 437 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 C11orf63Q6NUN7 778 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 PDZD4Q76G19 769 aaPredicted RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 RSRC2Q7L4I2 434 aaKnown RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 BEND5Q7L4P6 421 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 SLC35F6Q8N357 371 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 NIPA2Q8N8Q9 360 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 RNF139Q8WU17 664 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 SMG7Q92540 1137 aaKnown RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 TCEAL4Q96EI5 215 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 TBCBQ99426 244 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 CNPY3Q9BT09 278 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 TRIM62Q9BVG3 475 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 PIDD1Q9HB75 910 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 DZANK1Q9NVP4 752 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 CLDND1Q9NY35 253 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 ETAA1Q9NY74 926 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 COX16Q9P0S2 106 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 CDH22Q9UJ99 828 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 USTQ9Y2C2 406 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 ALG6Q9Y672 507 aa7.15□□□□□ -1.26
SCAF4-204ENST00000467731 HELZP42694 1942 aaKnown RBP7.15□□□□□ -1.26
SCAF4-204ENST00000467731 C2orf78A6NCI8 922 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 M0QYT0 321 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 DPYSL4O14531 572 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 MDM4O15151 490 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 LRCH4O75427 683 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 FTCDO95954 541 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 SRGAP2BP0DMP2 458 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 RALAP11233 206 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 TCF4P15884 667 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 COMTP21964 271 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 PTPN9P43378 593 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 PPP3CCP48454 512 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 EPHA5P54756 1037 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 GNG11P61952 73 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 SLC5A9Q2M3M2 681 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 CTC1Q2NKJ3 1217 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 PABPC1LQ4VXU2 614 aaKnown RBP7.15□□□□□ -1.27
SCAF4-204ENST00000467731 GPR153Q6NV75 609 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 ANKRD54Q6NXT1 300 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 SYCE2Q6PIF2 218 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 NYAP1Q6ZVC0 841 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 SLFN11Q7Z7L1 901 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 ARFGAP1Q8N6T3 406 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.15□□□□□ -1.27
SCAF4-204ENST00000467731 DQX1Q8TE96 717 aaKnown RBP7.15□□□□□ -1.27
SCAF4-204ENST00000467731 FAM172AQ8WUF8 416 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 MYLIPQ8WY64 445 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 WDR24Q96S15 920 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 NPY6RQ99463 290 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 CDX2Q99626 313 aaPredicted RBP7.15□□□□□ -1.27
SCAF4-204ENST00000467731 ATXN3LQ9H3M9 355 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 CLEC1BQ9P126 229 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 SFMBT1Q9UHJ3 866 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 PACSIN2Q9UNF0 486 aaPredicted RBP7.15□□□□□ -1.27
SCAF4-204ENST00000467731 TRIOO75962 3097 aa7.15□□□□□ -1.27
SCAF4-204ENST00000467731 MSI1O43347 362 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms