RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CYP17A1P05093 508 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 AOC1P19801 751 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 CLCN5P51795 746 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 PTP4A2Q12974 167 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 NNTQ13423 1086 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 GAB4Q2WGN9 574 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 SYPL2Q5VXT5 272 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 OR6B2Q6IFH4 312 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 TXNDC11Q6PKC3 985 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 PHF13Q86YI8 300 aaPredicted RBP21.22■□□□□ 0.99
SKA3-205ENST00000465471 MSANTD4Q8NCY6 345 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 TTC8Q8TAM2 541 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 OSBPL6Q9BZF3 934 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 MFSD1Q9H3U5 465 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 HAUS4Q9H6D7 363 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 LTB4R2Q9NPC1 389 aa21.22■□□□□ 0.99
SKA3-205ENST00000465471 LSM7Q9UK45 103 aaKnown RBP21.22■□□□□ 0.99
SKA3-205ENST00000465471 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.22■□□□□ 0.99
SKA3-205ENST00000465471 MSI1O43347 362 aaKnown RBP21.21■□□□□ 0.99
SKA3-205ENST00000465471 DAB1O75553 588 aa21.21■□□□□ 0.99
SKA3-205ENST00000465471 GJA4P35212 333 aa21.21■□□□□ 0.99
SKA3-205ENST00000465471 KPNA1P52294 538 aaPredicted RBP21.21■□□□□ 0.99
SKA3-205ENST00000465471 GSCP56915 257 aaPredicted RBP21.21■□□□□ 0.99
SKA3-205ENST00000465471 EIF4EBP2Q13542 120 aaPredicted RBP21.21■□□□□ 0.99
SKA3-205ENST00000465471 HGSNATQ68CP4 663 aa21.21■□□□□ 0.99
SKA3-205ENST00000465471 ASTLQ6HA08 431 aaPredicted RBP21.21■□□□□ 0.99
SKA3-205ENST00000465471 RHBDF2Q6PJF5 856 aa21.21■□□□□ 0.99
SKA3-205ENST00000465471 ZNF852Q6ZMS4 543 aa21.21■□□□□ 0.99
SKA3-205ENST00000465471 ZNF571Q7Z3V5 609 aaPredicted RBP21.21■□□□□ 0.99
SKA3-205ENST00000465471 PJA1Q8NG27 643 aa21.21■□□□□ 0.99
SKA3-205ENST00000465471 FOXQ1Q9C009 403 aa21.21■□□□□ 0.99
SKA3-205ENST00000465471 DCLK3Q9C098 648 aa21.21■□□□□ 0.99
SKA3-205ENST00000465471 ZNF510Q9Y2H8 683 aa21.21■□□□□ 0.99
SKA3-205ENST00000465471 LUC7L2Q9Y383 392 aaKnown RBP21.21■□□□□ 0.99
SKA3-205ENST00000465471 HMBSP08397 361 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 CD72P21854 359 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 TARSP26639 723 aaKnown RBP21.2■□□□□ 0.98
SKA3-205ENST00000465471 CORO1AP31146 461 aaKnown RBP21.2■□□□□ 0.98
SKA3-205ENST00000465471 CASP14P31944 242 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 RING1Q06587 406 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 TRIM14Q14142 442 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 ARID5BQ14865 1188 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 DHCR24Q15392 516 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 C2CD6Q53TS8 623 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 MMS22LQ6ZRQ5 1243 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 TAC4Q86UU9 113 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 FAM217AQ8IXS0 508 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 CCDC105Q8IYK2 499 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 DEFB106AQ8N104 65 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 FLCNQ8NFG4 579 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 SLC30A5Q8TAD4 765 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 FAM3CQ92520 227 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 SLC39A13Q96H72 371 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 SERPINB11Q96P15 392 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 MYOFQ9NZM1 2061 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 KIAA1549LQ6ZVL6 1849 aa21.2■□□□□ 0.98
SKA3-205ENST00000465471 FAM170AA1A519 330 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 CAPN9O14815 690 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 LATS1O95835 1130 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 HNRNPH3P31942 346 aaKnown RBP21.19■□□□□ 0.98
SKA3-205ENST00000465471 NSFP46459 744 aaKnown RBP21.19■□□□□ 0.98
SKA3-205ENST00000465471 PITX1P78337 314 aaPredicted RBP21.19■□□□□ 0.98
SKA3-205ENST00000465471 KLHL30Q0D2K2 578 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 FZD5Q13467 585 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 MON1BQ7L1V2 547 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 ARCQ7LC44 396 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 SUGP1Q8IWZ8 645 aaKnown RBP21.19■□□□□ 0.98
SKA3-205ENST00000465471 TMEM105Q8N8V8 129 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 CPLX3Q8WVH0 158 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 FCRL2Q96LA5 508 aaPredicted RBP21.19■□□□□ 0.98
SKA3-205ENST00000465471 NELL2Q99435 816 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 C11orf70Q9BRQ4 267 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 SPHK2Q9NRA0 654 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 MARK1Q9P0L2 795 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 DLGAP2Q9P1A6 1054 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 STOML2Q9UJZ1 356 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 TMEM59LQ9UK28 342 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 AGO1Q9UL18 857 aaKnown RBP21.19■□□□□ 0.98
SKA3-205ENST00000465471 TLR6Q9Y2C9 796 aa21.19■□□□□ 0.98
SKA3-205ENST00000465471 MRPS17Q9Y2R5 130 aaKnown RBP21.19■□□□□ 0.98
SKA3-205ENST00000465471 MTF2Q9Y483 593 aaPredicted RBP21.19■□□□□ 0.98
SKA3-205ENST00000465471 TRDMT1O14717 391 aaKnown RBP21.18■□□□□ 0.98
SKA3-205ENST00000465471 IRAK2O43187 625 aa21.18■□□□□ 0.98
SKA3-205ENST00000465471 HOXC11O43248 304 aaPredicted RBP21.18■□□□□ 0.98
SKA3-205ENST00000465471 PI15O43692 258 aa21.18■□□□□ 0.98
SKA3-205ENST00000465471 GRAP2O75791 330 aa21.18■□□□□ 0.98
SKA3-205ENST00000465471 TRUB2O95900 331 aaKnown RBP21.18■□□□□ 0.98
SKA3-205ENST00000465471 ADH1CP00326 375 aa21.18■□□□□ 0.98
SKA3-205ENST00000465471 VCPP55072 806 aaKnown RBP21.18■□□□□ 0.98
SKA3-205ENST00000465471 C1QBPQ07021 282 aaKnown RBP21.18■□□□□ 0.98
SKA3-205ENST00000465471 NR1H3Q13133 447 aa21.18■□□□□ 0.98
SKA3-205ENST00000465471 DCAF6Q58WW2 860 aa21.18■□□□□ 0.98
SKA3-205ENST00000465471 LY6G5CQ5SRR4 150 aa21.18■□□□□ 0.98
SKA3-205ENST00000465471 FAM102AQ5T9C2 384 aaPredicted RBP21.18■□□□□ 0.98
SKA3-205ENST00000465471 OTUD1Q5VV17 481 aaPredicted RBP21.18■□□□□ 0.98
SKA3-205ENST00000465471 NT5C3BQ969T7 300 aa21.18■□□□□ 0.98
SKA3-205ENST00000465471 ANP32EQ9BTT0 268 aa21.18■□□□□ 0.98
SKA3-205ENST00000465471 BZW2Q9Y6E2 419 aaKnown RBP21.18■□□□□ 0.98
SKA3-205ENST00000465471 TCRBV5S1A1TA0A578 114 aa21.17■□□□□ 0.98
SKA3-205ENST00000465471 GFRA2O00451 464 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms