RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 MYH10P35580 1976 aa23.81■■□□□ 1.4
USP4-208ENST00000464168 ANKRD11Q6UB99 2663 aaPredicted RBP23.8■■□□□ 1.4
USP4-208ENST00000464168 A0A1W2PQD8 194 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 MAPK13O15264 365 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 CILPO75339 1184 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 KLKB1P03952 638 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 CD59P13987 128 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 TRIM21P19474 475 aaKnown RBP23.8■■□□□ 1.4
USP4-208ENST00000464168 GCLMP48507 274 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 FAM193AP78312 1265 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 PPP3CAQ08209 521 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 CCDC186Q7Z3E2 898 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 TAS1R2Q8TE23 839 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 NAGPAQ9UK23 515 aa23.8■■□□□ 1.4
USP4-208ENST00000464168 FREM2Q5SZK8 3169 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 CEP192Q8TEP8 1941 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 A0A1B0GVL5 298 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 CALUO43852 315 aaPredicted RBP23.79■■□□□ 1.4
USP4-208ENST00000464168 TRIM49P0CI25 452 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 TRIM49CP0CI26 452 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 PFKFB1P16118 471 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 CD58P19256 250 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 DUSP16Q9BY84 665 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 IMPG2Q9BZV3 1241 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 NIF3L1Q9GZT8 377 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 DNAAF2Q9NVR5 837 aaKnown RBP23.79■■□□□ 1.4
USP4-208ENST00000464168 USP25Q9UHP3 1055 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 KLK13Q9UKR3 277 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 SLC27A6Q9Y2P4 619 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 MSRB2Q9Y3D2 182 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 USP3Q9Y6I4 520 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 STON1Q9Y6Q2 735 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 PCDH15Q96QU1 1955 aa23.79■■□□□ 1.4
USP4-208ENST00000464168 ADAMTS9Q9P2N4 1935 aa23.78■■□□□ 1.4
USP4-208ENST00000464168 NDUFS2O75306 463 aa23.78■■□□□ 1.4
USP4-208ENST00000464168 PENKP01210 267 aaPredicted RBP23.78■■□□□ 1.4
USP4-208ENST00000464168 MYL1P05976 194 aa23.78■■□□□ 1.4
USP4-208ENST00000464168 SYPP08247 313 aa23.78■■□□□ 1.4
USP4-208ENST00000464168 CMA1P23946 247 aa23.78■■□□□ 1.4
USP4-208ENST00000464168 PSEN1P49768 467 aa23.78■■□□□ 1.4
USP4-208ENST00000464168 PPP1R26Q5T8A7 1209 aaPredicted RBP23.78■■□□□ 1.4
USP4-208ENST00000464168 TADA2BQ86TJ2 420 aa23.78■■□□□ 1.4
USP4-208ENST00000464168 CLIC5Q9NZA1 410 aa23.78■■□□□ 1.4
USP4-208ENST00000464168 NFIL3Q16649 462 aa23.77■■□□□ 1.4
USP4-208ENST00000464168 KIAA1324Q6UXG2 1013 aaKnown RBP23.77■■□□□ 1.4
USP4-208ENST00000464168 INTS8Q75QN2 995 aaKnown RBP23.77■■□□□ 1.4
USP4-208ENST00000464168 FAM124BQ9H5Z6 455 aaPredicted RBP23.77■■□□□ 1.4
USP4-208ENST00000464168 HPSEQ9Y251 543 aa23.77■■□□□ 1.4
USP4-208ENST00000464168 ZNF510Q9Y2H8 683 aa23.77■■□□□ 1.4
USP4-208ENST00000464168 SRRM3A6NNA2 597 aaPredicted RBP23.76■■□□□ 1.39
USP4-208ENST00000464168 GJB3O75712 270 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 KIF20AO95235 890 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 RALAP11233 206 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 NR2F2P24468 414 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 MAOBP27338 520 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 MFAP3P55082 362 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 COG7P83436 770 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 PLEKHG6Q3KR16 790 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 FUT11Q495W5 492 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 SYCP2LQ5T4T6 812 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 FYB2Q5VWT5 728 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 METTL3Q86U44 580 aaKnown RBP23.76■■□□□ 1.39
USP4-208ENST00000464168 RGL4Q8IZJ4 473 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 FOXJ1Q92949 421 aa23.76■■□□□ 1.39
USP4-208ENST00000464168 THAP10Q9P2Z0 257 aaPredicted RBP23.76■■□□□ 1.39
USP4-208ENST00000464168 H0Y626 953 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 RHOBTB3O94955 611 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 TRIM16O95361 564 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 HSP90AA1P07900 732 aaKnown RBP23.75■■□□□ 1.39
USP4-208ENST00000464168 CD6P30203 668 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 ENPP2Q13822 863 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 GEN1Q17RS7 908 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 ZNF394Q53GI3 561 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 FAM186BQ8IYM0 893 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 CHCHD4Q8N4Q1 142 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 ZCCHC14Q8WYQ9 949 aaKnown RBP23.75■■□□□ 1.39
USP4-208ENST00000464168 HEXIM2Q96MH2 286 aaKnown RBP23.75■■□□□ 1.39
USP4-208ENST00000464168 CAMK1GQ96NX5 476 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 CDK5RAP1Q96SZ6 601 aaKnown RBP23.75■■□□□ 1.39
USP4-208ENST00000464168 MKRN2Q9H000 416 aaKnown RBP23.75■■□□□ 1.39
USP4-208ENST00000464168 MMRN2Q9H8L6 949 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 SUSD2Q9UGT4 822 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 RASAL2Q9UJF2 1139 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 MAPK8IP1Q9UQF2 711 aa23.75■■□□□ 1.39
USP4-208ENST00000464168 FAM221BA6H8Z2 402 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 NPC1O15118 1278 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 SH3BP5O60239 455 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 HMBSP08397 361 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 PRR29P0C7W0 189 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 KRT13P13646 458 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 CORO1AP31146 461 aaKnown RBP23.74■■□□□ 1.39
USP4-208ENST00000464168 CHKAP35790 457 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 ENPEPQ07075 957 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 EFEMP1Q12805 493 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 SLC14A1Q13336 389 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 HNRNPDQ14103 355 aaKnown RBP23.74■■□□□ 1.39
USP4-208ENST00000464168 STARD3Q14849 445 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 WDR45BQ5MNZ6 344 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 HSCBQ8IWL3 235 aa23.74■■□□□ 1.39
USP4-208ENST00000464168 TOE1Q96GM8 510 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms