RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 LYPLA2O95372 231 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 OSMP13725 252 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 UBA1P22314 1058 aaKnown RBP8.02□□□□□ -1.13
UBE4B-204ENST00000462658 PRCPP42785 496 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 ACTR2P61160 394 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 PSMC5P62195 406 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 SP4Q02446 784 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 MAP2K1Q02750 393 aaPredicted RBP8.02□□□□□ -1.13
UBE4B-204ENST00000462658 MGAT5Q09328 741 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 CRHR2Q13324 411 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 STIM1Q13586 685 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 GIT2Q14161 759 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 NEDD9Q14511 834 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 LY6KQ17RY6 165 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 KLHL10Q6JEL2 608 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 RINT1Q6NUQ1 792 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 SWSAP1Q6NVH7 229 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 MIS18BP1Q6P0N0 1132 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 PGM2L1Q6PCE3 622 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 ABHD15Q6UXT9 468 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 ARMCX2Q7L311 632 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 CLEC14AQ86T13 490 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 CCDC65Q8IXS2 484 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 C4orf19Q8IY42 314 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 ADSSL1Q8N142 457 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 GFM2Q969S9 779 aaKnown RBP8.02□□□□□ -1.13
UBE4B-204ENST00000462658 LRRC37BQ96QE4 947 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 PANK4Q9NVE7 773 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 GDAQ9Y2T3 454 aa8.02□□□□□ -1.13
UBE4B-204ENST00000462658 ARHGEF35A5YM69 484 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 MATN2O00339 956 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 AP5Z1O43299 807 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 LAMTOR5O43504 91 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 SEC24DO94855 1032 aaPredicted RBP8.01□□□□□ -1.13
UBE4B-204ENST00000462658 ADCY5O95622 1261 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 GGPS1O95749 300 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 SUPT20HL2P0C7V6 817 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 XPAP23025 273 aaPredicted RBP8.01□□□□□ -1.13
UBE4B-204ENST00000462658 PPP1R2P41236 205 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 STX17P56962 302 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 SESN2P58004 480 aaPredicted RBP8.01□□□□□ -1.13
UBE4B-204ENST00000462658 STK4Q13043 487 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 COASYQ13057 564 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 SPIDRQ14159 915 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 UGCGQ16739 394 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 HERC4Q5GLZ8 1057 aaPredicted RBP8.01□□□□□ -1.13
UBE4B-204ENST00000462658 ZFYVE27Q5T4F4 411 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 MAMDC4Q6UXC1 1216 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 C1orf186Q6ZWK4 172 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 FBXO16Q8IX29 292 aaPredicted RBP8.01□□□□□ -1.13
UBE4B-204ENST00000462658 PIK3C3Q8NEB9 887 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 C1orf162Q8NEQ5 155 aaPredicted RBP8.01□□□□□ -1.13
UBE4B-204ENST00000462658 PPP1R14CQ8TAE6 165 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 TSPEARQ8WU66 669 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 RSAD2Q8WXG1 361 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 CFHR4Q92496 578 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 ATP6V0A1Q93050 837 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 NEIL1Q96FI4 390 aaPredicted RBP8.01□□□□□ -1.13
UBE4B-204ENST00000462658 RAX2Q96IS3 184 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 MLXIPQ9HAP2 919 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 GABBR1Q9UBS5 961 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 RWDD2AQ9UIY3 292 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 LCTP09848 1927 aa8.01□□□□□ -1.13
UBE4B-204ENST00000462658 DOCK3Q8IZD9 2030 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 GSTTP1A0A1W2PQM5 241 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 FRMD3A2A2Y4 597 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 PSMA7O14818 248 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 DAPK3O43293 454 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 ARIH2O95376 493 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 LY86O95711 162 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 GAAP10253 952 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 TXNP10599 105 aaKnown RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 YWHABP31946 246 aaKnown RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 GPR15P49685 360 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 RARRES1P49788 294 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 EPHB4P54760 987 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 HGFACQ04756 655 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 CCDC173Q0VFZ6 552 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 NFYCQ13952 458 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 PCBP2Q15366 365 aaKnown RBP eCLIP8□□□□□ -1.13
UBE4B-204ENST00000462658 CLUL1Q15846 466 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 TPD52L1Q16890 204 aaPredicted RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 COBLL1Q53SF7 1204 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 CELF3Q5SZQ8 465 aaKnown RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 SPATA1Q5VX52 437 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 TAPT1Q6NXT6 567 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 METTL7BQ6UX53 244 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 OTUD6AQ7L8S5 288 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 CCDC60Q8IWA6 550 aaPredicted RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 PLA2G15Q8NCC3 412 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 SCFD2Q8WU76 684 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 NELFBQ8WX92 580 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 AUTS2Q8WXX7 1259 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 SEPT1Q8WYJ6 367 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 GCDHQ92947 438 aaPredicted RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 HPS3Q969F9 1004 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 DHTKD1Q96HY7 919 aaPredicted RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 RPL10LQ96L21 214 aaKnown RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 CCDC43Q96MW1 224 aaKnown RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 SLC2A13Q96QE2 648 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms