RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 CCDC85BQ15834 202 aaPredicted RBP6.1□□□□□ -1.43
CLK1-207ENST00000461981 BOLA3Q53S33 107 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 IL23RQ5VWK5 629 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 ASTLQ6HA08 431 aaPredicted RBP6.1□□□□□ -1.43
CLK1-207ENST00000461981 CGB2Q6NT52 195 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 C4orf22Q6V702 233 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.1□□□□□ -1.43
CLK1-207ENST00000461981 DCDC5Q6ZRR9 648 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 ACAD11Q709F0 780 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 NOSTRINQ8IVI9 506 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 CCDC105Q8IYK2 499 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 CENPSQ8N2Z9 138 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 METTL25Q8N6Q8 603 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 EPS8L3Q8TE67 593 aaKnown RBP6.1□□□□□ -1.43
CLK1-207ENST00000461981 SLC22A17Q8WUG5 538 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 COPS5Q92905 334 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 ITPKCQ96DU7 683 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 MIPEPQ99797 713 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 AP1M1Q9BXS5 423 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 MRPL1Q9BYD6 325 aaKnown RBP6.1□□□□□ -1.43
CLK1-207ENST00000461981 MARCH7Q9H992 704 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 PLGRKTQ9HBL7 147 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 RIC8AQ9NPQ8 531 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 UCKL1Q9NWZ5 548 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 NDUFA13Q9P0J0 144 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 CLEC1BQ9P126 229 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 KLF15Q9UIH9 416 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 DBR1Q9UK59 544 aaKnown RBP6.1□□□□□ -1.43
CLK1-207ENST00000461981 CHKBQ9Y259 395 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 NUMBLQ9Y6R0 609 aa6.1□□□□□ -1.43
CLK1-207ENST00000461981 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.1□□□□□ -1.43
CLK1-207ENST00000461981 DDX3XO00571 662 aaKnown RBP eCLIP6.09□□□□□ -1.43
CLK1-207ENST00000461981 KMOO15229 486 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 TREHO43280 583 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 T-ENOLP0DO92 83 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 KCNA5P22460 613 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 AVPR2P30518 371 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 HOXA9P31269 272 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 ATICP31939 592 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 SREBF1P36956 1147 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 KLK7P49862 253 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 IST1P53990 364 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 GBE1Q04446 702 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 CUL1Q13616 776 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 WTAPQ15007 396 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 NDUFA5Q16718 116 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 CDONQ4KMG0 1287 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 TMEM63BQ5T3F8 832 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 FYB2Q5VWT5 728 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 TYW1BQ6NUM6 668 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 TMTC3Q6ZXV5 915 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 CYB5R4Q7L1T6 521 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 DDX53Q86TM3 631 aaKnown RBP6.09□□□□□ -1.43
CLK1-207ENST00000461981 RASSF3Q86WH2 238 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 SFR1Q86XK3 245 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 RHOT2Q8IXI1 618 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 LSMEM1Q8N8F7 131 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 TOR1AIP2Q8NFQ8 470 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 CAPSLQ8WWF8 208 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 GLG1Q92896 1179 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 MCUR1Q96AQ8 359 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 PAGE5Q96GU1 130 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 MED30Q96HR3 178 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 FAR2Q96K12 515 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 ZNF558Q96NG5 402 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 DNAJC7Q99615 494 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 UQCC2Q9BRT2 126 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 ALG1Q9BT22 464 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 NT5C3AQ9H0P0 336 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 DDX47Q9H0S4 455 aaKnown RBP6.09□□□□□ -1.43
CLK1-207ENST00000461981 RNPEPQ9H4A4 650 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 METTL14Q9HCE5 456 aaKnown RBP6.09□□□□□ -1.43
CLK1-207ENST00000461981 MAN1C1Q9NR34 630 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 SLC2A4RGQ9NR83 387 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.09□□□□□ -1.43
CLK1-207ENST00000461981 TBC1D23Q9NUY8 699 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 GIN1Q9NXP7 522 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 KANSL3Q9P2N6 904 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 ZNF212Q9UDV6 495 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 FBXO4Q9UKT5 387 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 CDY2AQ9Y6F7 541 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 WDR81Q562E7 1941 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 FRMPD2Q68DX3 1309 aaPredicted RBP6.09□□□□□ -1.43
CLK1-207ENST00000461981 MYOCOSA0A1B0GUC4 107 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 KCNJ18B7U540 433 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 H3BSA7 217 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 PSMD11O00231 422 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 NDC80O14777 642 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 SNX2O60749 519 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 ATP5HO75947 161 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 CREB1P16220 341 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 KRT4P19013 534 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 VCPP55072 806 aaKnown RBP6.09□□□□□ -1.43
CLK1-207ENST00000461981 MRPS9P82933 396 aaKnown RBP6.09□□□□□ -1.43
CLK1-207ENST00000461981 TFF2Q03403 129 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 KRT17Q04695 432 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 KCNA1Q09470 495 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 DPYDQ12882 1025 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 KCNJ12Q14500 433 aa6.09□□□□□ -1.43
CLK1-207ENST00000461981 SMU1Q2TAY7 513 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms