RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 MSI1O43347 362 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 GREM1O60565 184 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 LSM8O95777 96 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 EGFP01133 1207 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 APODP05090 189 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 GLI1P08151 1106 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 CCDC172P0C7W6 258 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 CDH5P33151 784 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 CHKAP35790 457 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 OPRD1P41143 372 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 UBASH3AP57075 661 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 ARID5AQ03989 594 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 TCF15Q12870 199 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 CCINQ13939 588 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 NR1I3Q14994 352 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 TRIP4Q15650 581 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 PREPLQ4J6C6 727 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 PTPN20Q4JDL3 420 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 EFHC1Q5JVL4 640 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 NAIF1Q69YI7 327 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 LRSAM1Q6UWE0 723 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 Q6ZNB5 142 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 TPGS1Q6ZTW0 290 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 TOGARAM2Q6ZUX3 1019 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 FAM183BPQ6ZVS7 135 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 ERICH1Q86X53 443 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 TMEM25Q86YD3 366 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 DENND1CQ8IV53 801 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 SLC20A1Q8WUM9 679 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 DDX1Q92499 740 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 ATOH1Q92858 354 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 NAP1L5Q96NT1 182 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 XPO6Q96QU8 1125 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 PNKPQ96T60 521 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 BBS2Q9BXC9 721 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 POPDC2Q9HBU9 364 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 WDR35Q9P2L0 1181 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 TJP2Q9UDY2 1190 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 NAALADL1Q9UQQ1 740 aa11.05□□□□□ -0.64
TRAPPC12-213ENST00000461577 NEDD8-MDP1E9PL57 170 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 HSF2BPO75031 334 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 KLKB1P03952 638 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 ERBB2P04626 1255 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 CYBBP04839 570 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 FYNP06241 537 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 FERP16591 822 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 EIF2DP41214 584 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 SLC6A11P48066 632 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 CCR3P51677 355 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 TBX4P57082 545 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 YWHAZP63104 245 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 CDR2Q01850 454 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 SLC6A3Q01959 620 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 MTAPQ13126 283 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 PPP2R5DQ14738 602 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 GAB4Q2WGN9 574 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 FBXO43Q4G163 708 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 NAA35Q5VZE5 725 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 NUGGCQ68CJ6 796 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 TRIM72Q6ZMU5 477 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 BEND5Q7L4P6 421 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 ZDHHC17Q8IUH5 632 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 UNC45BQ8IWX7 931 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 NAT16Q8N8M0 369 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 CCDC26Q8TAB7 109 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 DQX1Q8TE96 717 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 CPA5Q8WXQ8 436 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 C18orf8Q96DM3 657 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 SERPINB11Q96P15 392 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 FBRSL1Q9HCM7 1045 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 ARHGEF4Q9NR80 690 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 SEPT11Q9NVA2 429 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 ASNSD1Q9NWL6 643 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 AGO1Q9UL18 857 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 ATG2BQ96BY7 2078 aa11.04□□□□□ -0.64
TRAPPC12-213ENST00000461577 FAM170AA1A519 330 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 ATG13O75143 517 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 RNF40O75150 1001 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 GRAP2O75791 330 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 LATS1O95835 1130 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 TYRP14679 529 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 CHRNB2P17787 502 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 GBP1P32455 592 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 SLC11A2P49281 568 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 NOMO3P69849 1222 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 CDK17Q00537 523 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 FMO1Q01740 532 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 CSTF1Q05048 431 aaKnown RBP11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 KDSRQ06136 332 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 NNTQ13423 1086 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 TAF5Q15542 800 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 DCAF6Q58WW2 860 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 SYPL2Q5VXT5 272 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 Q6ZS52 159 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 NUDT18Q6ZVK8 323 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 TAC4Q86UU9 113 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 C12orf40Q86WS4 652 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 DEFB106AQ8N104 65 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 CPXM2Q8N436 756 aa11.03□□□□□ -0.64
TRAPPC12-213ENST00000461577 SPEM1Q8N4L4 309 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms