RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 ZSCAN5DPP0CG00 497 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 PECAM1P16284 738 aaPredicted RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 RPL34P49207 117 aaKnown RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 SLC11A1P49279 550 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 CACNA2D1P54289 1103 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 GYS2P54840 703 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 BASP1P80723 227 aaKnown RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 DSC1Q08554 894 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 ELAVL2Q12926 359 aaKnown RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 IKBKEQ14164 716 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 NFE2Q16621 373 aaPredicted RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 CA9Q16790 459 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 VARS2Q5ST30 1063 aaKnown RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 KCTD16Q68DU8 428 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 FAM171BQ6P995 826 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 DRICH1Q6PGQ1 229 aaPredicted RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 CD300LGQ6UXG3 332 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 HFE2Q6ZVN8 426 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 B4GALNT4Q76KP1 1039 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 ZNF771Q7L3S4 317 aaPredicted RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 ARCQ7LC44 396 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 CTU1Q7Z7A3 348 aaKnown RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 PCGF5Q86SE9 256 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 HOOK3Q86VS8 718 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 LRRC43Q8N309 656 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 FAM71DQ8N9W8 422 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 ZMIZ2Q8NF64 920 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 IRGQQ8WZA9 623 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 KHSRPQ92945 711 aaKnown RBP eCLIP7.06□□□□□ -1.286e-6■■■■□ 21.5
MSH2-204ENST00000461394 NKD2Q969F2 451 aaPredicted RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 CASD1Q96PB1 797 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 PGLYRP2Q96PD5 576 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 SLC2A13Q96QE2 648 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 FERMT1Q9BQL6 677 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 ZNF670Q9BS34 389 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 ADAM33Q9BZ11 813 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 UBXN6Q9BZV1 441 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 NRDE2Q9H7Z3 1164 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 PCDH9Q9HC56 1237 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 DDIT4Q9NX09 232 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 RRN3Q9NYV6 651 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.06□□□□□ -1.28
MSH2-204ENST00000461394 TPX2Q9ULW0 747 aaKnown RBP7.06□□□□□ -1.28
MSH2-204ENST00000461394 FZD10Q9ULW2 581 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 PCDHB5Q9Y5E4 795 aa7.06□□□□□ -1.28
MSH2-204ENST00000461394 CFAP69A5D8W1 941 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 OR6C75A6NL08 312 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 YJEFN3A6XGL0 299 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 E7ENQ6 273 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 GOLGA8MH3BSY2 632 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 AGPSO00116 658 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 SYN3O14994 580 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 KCNN4O15554 427 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 STK10O94804 968 aaKnown RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 MAP3K6O95382 1288 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 ACSL3O95573 720 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 CLTBP09497 229 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 RARGP13631 454 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 GOT1P17174 413 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 AMPD1P23109 780 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 KLRC2P26717 231 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 L1CAMP32004 1257 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 CA8P35219 290 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 CHKAP35790 457 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 LMAN1P49257 510 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 SLC5A3P53794 718 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 EIF3BP55884 814 aaKnown RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 TPI1P60174 286 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 YWHAGP61981 247 aaKnown RBP eCLIP7.05□□□□□ -1.28
MSH2-204ENST00000461394 FAAP100Q0VG06 881 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 NOMO1Q15155 1222 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 OASLQ15646 514 aaKnown RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 UAP1Q16222 522 aaPredicted RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 TAZQ16635 292 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 GLIPR1L2Q4G1C9 344 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 DNAJC21Q5F1R6 531 aaKnown RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 SPDYCQ5MJ68 293 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 SDHAF4Q5VUM1 108 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 SYPL2Q5VXT5 272 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 BSPRYQ5W0U4 402 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 KIAA1841Q6NSI8 718 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 FAM117BQ6P1L5 589 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 FUT10Q6P4F1 479 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 CNKSR3Q6P9H4 555 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 CYP4V2Q6ZWL3 525 aaPredicted RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 PDZD4Q76G19 769 aaPredicted RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 TRMT10CQ7L0Y3 403 aaKnown RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 LRRTM3Q86VH5 581 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 UNC45BQ8IWX7 931 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 PYROXD2Q8N2H3 581 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 PCDH19Q8TAB3 1148 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 SLC35B2Q8TB61 432 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 DIS3LQ8TF46 1054 aaKnown RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 RNF139Q8WU17 664 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 PIK3R5Q8WYR1 880 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 CENPIQ92674 756 aaPredicted RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 B3GALT6Q96L58 329 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 NPY6RQ99463 290 aa7.05□□□□□ -1.28
MSH2-204ENST00000461394 SEPT5Q99719 369 aaPredicted RBP7.05□□□□□ -1.28
MSH2-204ENST00000461394 TMEM175Q9BSA9 504 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms