RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 TRIM62Q9BVG3 475 aa21.53■■□□□ 1.04
RPUSD3-210ENST00000460909 POPDC2Q9HBU9 364 aa21.53■■□□□ 1.04
RPUSD3-210ENST00000460909 LSM7Q9UK45 103 aaKnown RBP21.53■■□□□ 1.04
RPUSD3-210ENST00000460909 FAM170AA1A519 330 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 FAM170BA6NMN3 283 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 MSI1O43347 362 aaKnown RBP21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 IGLV3-27P01718 113 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 HMBSP08397 361 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 CCDC172P0C7W6 258 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 UBXN2BQ14CS0 331 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 C2CD6Q53TS8 623 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 SLC26A9Q7LBE3 791 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 GAS2L3Q86XJ1 694 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 XYLT1Q86Y38 959 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 ZDHHC17Q8IUH5 632 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 ZNF397Q8NF99 534 aaPredicted RBP21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 PLD4Q96BZ4 506 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 SLC2A13Q96QE2 648 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 SYNCQ9H7C4 482 aa21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 MRPS17Q9Y2R5 130 aaKnown RBP21.52■■□□□ 1.04
RPUSD3-210ENST00000460909 ITIH6Q6UXX5 1313 aa21.52■■□□□ 1.03
RPUSD3-210ENST00000460909 HSF2BPO75031 334 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 DCNP07585 359 aaKnown RBP21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 MMP8P22894 467 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 CORO1AP31146 461 aaKnown RBP21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 PRKCIP41743 596 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 NR1H3Q13133 447 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 CLEC16AQ2KHT3 1053 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 LY6G5CQ5SRR4 150 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 SFMBT2Q5VUG0 894 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 NAIF1Q69YI7 327 aaPredicted RBP21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 TOGARAM2Q6ZUX3 1019 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 TMEM25Q86YD3 366 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 SLC30A5Q8TAD4 765 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 CLDN23Q96B33 292 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 IQCDQ96DY2 449 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 DCLK3Q9C098 648 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 RBSNQ9H1K0 784 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 FBRSL1Q9HCM7 1045 aaKnown RBP21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 SPHK2Q9NRA0 654 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 CAPN11Q9UMQ6 739 aa21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 NDRG2Q9UN36 371 aaKnown RBP21.51■■□□□ 1.03
RPUSD3-210ENST00000460909 TRDMT1O14717 391 aaKnown RBP21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 AP5Z1O43299 807 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 CBFA2T2O43439 604 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 IGLV3-25P01717 112 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 GYPCP04921 128 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 TPM3P06753 285 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 SCNN1AP37088 669 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 OPRD1P41143 372 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 PITX1P78337 314 aaPredicted RBP21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 CENPCQ03188 943 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 PTP4A2Q12974 167 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 EIF4EBP2Q13542 120 aaPredicted RBP21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 PON2Q15165 354 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 ASIC2Q16515 512 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 DENND1CQ8IV53 801 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 DEFB106AQ8N104 65 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 AGO1Q9UL18 857 aaKnown RBP21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 ZNF510Q9Y2H8 683 aa21.5■■□□□ 1.03
RPUSD3-210ENST00000460909 CAPN9O14815 690 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 GRAP2O75791 330 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 ADH1CP00326 375 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 CHRNB1P11230 501 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 GALK1P51570 392 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 AMPD2Q01433 879 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 RING1Q06587 406 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 NNTQ13423 1086 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 DCAF6Q58WW2 860 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 TMEM196Q5HYL7 178 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 SARM1Q6SZW1 724 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 TAC4Q86UU9 113 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 PHF13Q86YI8 300 aaPredicted RBP21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 FAM217AQ8IXS0 508 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 ADAM32Q8TC27 787 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 SYN2Q92777 582 aaPredicted RBP21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 P2RY11Q96G91 374 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 SLC39A13Q96H72 371 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 HAUS4Q9H6D7 363 aa21.49■■□□□ 1.03
RPUSD3-210ENST00000460909 HOXC11O43248 304 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 DAB1O75553 588 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 TRUB2O95900 331 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 ADH5P11766 374 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 RPS9P46781 194 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 ZBED6P86452 979 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 CCINQ13939 588 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 HGSNATQ68CP4 663 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 FSTL4Q6MZW2 842 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 MMS22LQ6ZRQ5 1243 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 ZNF571Q7Z3V5 609 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 VSTM4Q8IW00 320 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 MSANTD4Q8NCY6 345 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 CPLX3Q8WVH0 158 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 FCRL2Q96LA5 508 aaPredicted RBP21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 SERPINB11Q96P15 392 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 NUCKS1Q9H1E3 243 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 MARK1Q9P0L2 795 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 STOML2Q9UJZ1 356 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 TMEM59LQ9UK28 342 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 TLR6Q9Y2C9 796 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms