RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 CD48P09326 243 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 SLC5A2P31639 672 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 EIF3EP60228 445 aaKnown RBP16.02■□□□□ 0.15
SSR4-206ENST00000460616 PPIDQ08752 370 aaKnown RBP16.02■□□□□ 0.15
SSR4-206ENST00000460616 KRT81Q14533 505 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 ZACNQ401N2 412 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 KCNT1Q5JUK3 1230 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 TSHZ1Q6ZSZ6 1077 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 AHI1Q8N157 1196 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 PQLC1Q8N2U9 271 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 LRRC43Q8N309 656 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 DDI1Q8WTU0 396 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 MMP19Q99542 508 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 PRPF18Q99633 342 aaKnown RBP16.02■□□□□ 0.15
SSR4-206ENST00000460616 MRPL1Q9BYD6 325 aaKnown RBP16.02■□□□□ 0.15
SSR4-206ENST00000460616 C6orf203Q9P0P8 240 aaPredicted RBP16.02■□□□□ 0.15
SSR4-206ENST00000460616 THEGQ9P2T0 379 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 ZNF112Q9UJU3 913 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 DNAJC16Q9Y2G8 782 aa16.02■□□□□ 0.15
SSR4-206ENST00000460616 HNRNPDLO14979 420 aaKnown RBP16.01■□□□□ 0.15
SSR4-206ENST00000460616 DHX15O43143 795 aaKnown RBP16.01■□□□□ 0.15
SSR4-206ENST00000460616 CRTAMO95727 393 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 C1QAP02745 245 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 ITGAXP20702 1163 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 CRHR1P34998 444 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 XKR9Q5GH70 373 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 C1QTNF12Q5T7M4 302 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 TDRD10Q5VZ19 366 aaKnown RBP16.01■□□□□ 0.15
SSR4-206ENST00000460616 RNF168Q8IYW5 571 aaPredicted RBP16.01■□□□□ 0.15
SSR4-206ENST00000460616 NUP93Q8N1F7 819 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 APBB2Q92870 758 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 ZNF696Q9H7X3 374 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 MKS1Q9NXB0 559 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 PSMD13Q9UNM6 376 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 TTLL3Q9Y4R7 772 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 H3BSA7 217 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 KRT38O76015 456 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 LYPLA2O95372 231 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 C4BPAP04003 597 aaKnown RBP16.01■□□□□ 0.15
SSR4-206ENST00000460616 MYBPC1Q00872 1141 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 CBX3Q13185 183 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 SH3D19Q5HYK7 790 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 POLNQ7Z5Q5 900 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 ZNF410Q86VK4 478 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 ZBTB8BQ8NAP8 495 aaPredicted RBP16.01■□□□□ 0.15
SSR4-206ENST00000460616 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 STN1Q9H668 368 aaKnown RBP16.01■□□□□ 0.15
SSR4-206ENST00000460616 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 APOBEC3GQ9HC16 384 aaKnown RBP16.01■□□□□ 0.15
SSR4-206ENST00000460616 GPBP1L1Q9HC44 474 aaPredicted RBP16.01■□□□□ 0.15
SSR4-206ENST00000460616 HOMER2Q9NSB8 354 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 SLC9A2Q9UBY0 812 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 SH3GLB1Q9Y371 365 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 AK5Q9Y6K8 562 aa16.01■□□□□ 0.15
SSR4-206ENST00000460616 RBBP6Q7Z6E9 1792 aaKnown RBP16■□□□□ 0.15
SSR4-206ENST00000460616 TCRBV5S1A1TA0A578 114 aa16■□□□□ 0.15
SSR4-206ENST00000460616 LYPLA1O75608 230 aaPredicted RBP16■□□□□ 0.15
SSR4-206ENST00000460616 RBP3P10745 1247 aa16■□□□□ 0.15
SSR4-206ENST00000460616 L1CAMP32004 1257 aa16■□□□□ 0.15
SSR4-206ENST00000460616 CLCN2P51788 898 aa16■□□□□ 0.15
SSR4-206ENST00000460616 ENPEPQ07075 957 aa16■□□□□ 0.15
SSR4-206ENST00000460616 KLHL35Q6PF15 583 aa16■□□□□ 0.15
SSR4-206ENST00000460616 BORAQ6PGQ7 559 aa16■□□□□ 0.15
SSR4-206ENST00000460616 TRIM67Q6ZTA4 783 aa16■□□□□ 0.15
SSR4-206ENST00000460616 ZNF778Q96MU6 729 aa16■□□□□ 0.15
SSR4-206ENST00000460616 ZC3H7BQ9UGR2 993 aaKnown RBP16■□□□□ 0.15
SSR4-206ENST00000460616 MRPL11Q9Y3B7 192 aaKnown RBP16■□□□□ 0.15
SSR4-206ENST00000460616 AP4B1Q9Y6B7 739 aa16■□□□□ 0.15
SSR4-206ENST00000460616 PTPRFP10586 1907 aa16■□□□□ 0.15
SSR4-206ENST00000460616 TRDMT1O14717 391 aaKnown RBP16■□□□□ 0.15
SSR4-206ENST00000460616 ITM2AO43736 263 aa16■□□□□ 0.15
SSR4-206ENST00000460616 UGT1A9O60656 530 aa16■□□□□ 0.15
SSR4-206ENST00000460616 ASNSP08243 561 aa16■□□□□ 0.15
SSR4-206ENST00000460616 KDELR1P24390 212 aa16■□□□□ 0.15
SSR4-206ENST00000460616 NR1H2P55055 460 aa16■□□□□ 0.15
SSR4-206ENST00000460616 MTTPP55157 894 aa16■□□□□ 0.15
SSR4-206ENST00000460616 SPP2Q13103 211 aa16■□□□□ 0.15
SSR4-206ENST00000460616 VGLL4Q14135 290 aa16■□□□□ 0.15
SSR4-206ENST00000460616 GK3PQ14409 553 aa16■□□□□ 0.15
SSR4-206ENST00000460616 FASTKD1Q53R41 847 aaKnown RBP16■□□□□ 0.15
SSR4-206ENST00000460616 WDR78Q5VTH9 848 aa16■□□□□ 0.15
SSR4-206ENST00000460616 LRRC8BQ6P9F7 803 aa16■□□□□ 0.15
SSR4-206ENST00000460616 PAOXQ6QHF9 649 aa16■□□□□ 0.15
SSR4-206ENST00000460616 THNSL1Q8IYQ7 743 aa16■□□□□ 0.15
SSR4-206ENST00000460616 NIPA2Q8N8Q9 360 aa16■□□□□ 0.15
SSR4-206ENST00000460616 HSPBAP1Q96EW2 488 aa16■□□□□ 0.15
SSR4-206ENST00000460616 LRGUKQ96M69 825 aa16■□□□□ 0.15
SSR4-206ENST00000460616 UGT1A7Q9HAW7 530 aa16■□□□□ 0.15
SSR4-206ENST00000460616 UGT1A10Q9HAW8 530 aa16■□□□□ 0.15
SSR4-206ENST00000460616 UGT1A8Q9HAW9 530 aa16■□□□□ 0.15
SSR4-206ENST00000460616 IFT122Q9HBG6 1241 aa16■□□□□ 0.15
SSR4-206ENST00000460616 VNN1O95497 513 aa15.99■□□□□ 0.15
SSR4-206ENST00000460616 KRT7P08729 469 aa15.99■□□□□ 0.15
SSR4-206ENST00000460616 FAM58BPP0C7Q3 252 aa15.99■□□□□ 0.15
SSR4-206ENST00000460616 NCF2P19878 526 aaPredicted RBP15.99■□□□□ 0.15
SSR4-206ENST00000460616 GARTP22102 1010 aa15.99■□□□□ 0.15
SSR4-206ENST00000460616 SLC1A6P48664 564 aa15.99■□□□□ 0.15
SSR4-206ENST00000460616 TAP1Q03518 808 aa15.99■□□□□ 0.15
SSR4-206ENST00000460616 PEX6Q13608 980 aa15.99■□□□□ 0.15
SSR4-206ENST00000460616 UGCGQ16739 394 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms