RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 C11orf49Q9H6J7 331 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 AASDHPPTQ9NRN7 309 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 KRT82Q9NSB4 513 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 DNAJB4Q9UDY4 337 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 TMEM59LQ9UK28 342 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 EFR3BQ9Y2G0 817 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.78□□□□□ -0.68
HERC4-207ENST00000460168 MYBPHLA2RUH7 354 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 XPO1O14980 1071 aaKnown RBP10.78□□□□□ -0.68
HERC4-207ENST00000460168 PAPSS1O43252 624 aaPredicted RBP10.78□□□□□ -0.68
HERC4-207ENST00000460168 CYP11A1P05108 521 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TUBBP07437 444 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 ACADSBP45954 432 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 MRPS25P82663 173 aaKnown RBP10.78□□□□□ -0.68
HERC4-207ENST00000460168 PLCB3Q01970 1234 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 YWHAHQ04917 246 aaPredicted RBP10.78□□□□□ -0.68
HERC4-207ENST00000460168 MAP7Q14244 749 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 LLGL1Q15334 1064 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TCTN1Q2MV58 587 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 CD300LGQ6UXG3 332 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 ZDHHC17Q8IUH5 632 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 RELL1Q8IUW5 271 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 THEM5Q8N1Q8 247 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TMCO5AQ8N6Q1 288 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 MYCBPAPQ8TBZ2 947 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 NR1H4Q96RI1 486 aaPredicted RBP10.78□□□□□ -0.68
HERC4-207ENST00000460168 ACBD6Q9BR61 282 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 PREBQ9HCU5 417 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TBX21Q9UL17 535 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TTC3P53804 2025 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TSC2P49815 1807 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TRAPPC3O43617 180 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TADA2AO75478 443 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TCF4P15884 667 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 PDGFRAP16234 1089 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 GATMP50440 423 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 PMS2P54278 862 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 SLC6A3Q01959 620 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 GLE1Q53GS7 698 aaKnown RBP10.78□□□□□ -0.68
HERC4-207ENST00000460168 CFAP58Q5T655 872 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 CLEC20AQ6ZU45 233 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 CCDC121Q6ZUS5 278 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 PIGZQ86VD9 579 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 NPAS4Q8IUM7 802 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 FAM71BQ8TC56 605 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 HSFY1Q96LI6 401 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 CASD1Q96PB1 797 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 TMEM106CQ9BVX2 250 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 DDX47Q9H0S4 455 aaKnown RBP10.78□□□□□ -0.68
HERC4-207ENST00000460168 CYLDQ9NQC7 956 aa10.78□□□□□ -0.68
HERC4-207ENST00000460168 NOSIPQ9Y314 301 aaKnown RBP10.78□□□□□ -0.68
HERC4-207ENST00000460168 CCDC151A5D8V7 595 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 TTC34A8MYJ7 566 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 TMEM189-UBE2V1I3L0A0 370 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 ZMYND10O75800 440 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 BEST1O76090 585 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 UPP2O95045 317 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 TYMPP19971 482 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 GPD1P21695 349 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 CTCFP49711 727 aaPredicted RBP10.77□□□□□ -0.68
HERC4-207ENST00000460168 ZNF143P52747 638 aaPredicted RBP10.77□□□□□ -0.68
HERC4-207ENST00000460168 MAP3K7CLP57077 242 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 VSNL1P62760 191 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 TSPY1Q01534 308 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 ADIGQ0VDE8 80 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 BLMHQ13867 455 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 IKBKEQ14164 716 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 TAF5Q15542 800 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 CDO1Q16878 200 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 LRRC26Q2I0M4 334 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 PAQR9Q6ZVX9 377 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 YTHDF3Q7Z739 585 aaKnown RBP10.77□□□□□ -0.68
HERC4-207ENST00000460168 FAM35AQ86V20 835 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 SLC13A5Q86YT5 568 aaPredicted RBP10.77□□□□□ -0.68
HERC4-207ENST00000460168 KATNAL2Q8IYT4 538 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 GSDMBQ8TAX9 411 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 TRPC4APQ8TEL6 797 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 ZFPM2Q8WW38 1151 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 RNF25Q96BH1 459 aaPredicted RBP10.77□□□□□ -0.68
HERC4-207ENST00000460168 SMARCD1Q96GM5 515 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 HINFPQ9BQA5 517 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 RTP3Q9BQQ7 232 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 MRPL9Q9BYD2 267 aaKnown RBP10.77□□□□□ -0.68
HERC4-207ENST00000460168 PLEKHA4Q9H4M7 779 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 LRRC4Q9HBW1 653 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 PRDM5Q9NQX1 630 aaPredicted RBP10.77□□□□□ -0.68
HERC4-207ENST00000460168 KLHL11Q9NVR0 708 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 ASNSD1Q9NWL6 643 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 STIM2Q9P246 746 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 MTUS1Q9ULD2 1270 aa10.77□□□□□ -0.68
HERC4-207ENST00000460168 C2CD4BA6NLJ0 364 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 SHOX2O60902 331 aaPredicted RBP10.77□□□□□ -0.69
HERC4-207ENST00000460168 LRCH4O75427 683 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 CETN2P41208 172 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 LRP8Q14114 963 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 ACAP1Q15027 740 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 BRD3Q15059 726 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 HADHQ16836 314 aaKnown RBP10.77□□□□□ -0.69
HERC4-207ENST00000460168 ATP13A4Q4VNC1 1196 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 INTS6LQ5JSJ4 861 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms