RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TMEM51Q9NW97 253 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 RAPGEFL1Q9UHV5 662 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 MYO6Q9UM54 1294 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 TICRRQ7Z2Z1 1910 aa16.87■□□□□ 0.29
CD28-203ENST00000458610 A0A1B0GTH6 734 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 H0Y858 1186 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 PAPSS1O43252 624 aaPredicted RBP16.86■□□□□ 0.29
CD28-203ENST00000458610 GREM1O60565 184 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 LATS1O95835 1130 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 APODP05090 189 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 CDH5P33151 784 aaPredicted RBP16.86■□□□□ 0.29
CD28-203ENST00000458610 CXCL12P48061 93 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 CDR2Q01850 454 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 RING1Q06587 406 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 MTAPQ13126 283 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 NFKBIBQ15653 356 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 NUGGCQ68CJ6 796 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 OR6B2Q6IFH4 312 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 FSTL4Q6MZW2 842 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 LUZP1Q86V48 1076 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 ERICH1Q86X53 443 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 DENND1CQ8IV53 801 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 CLEC4CQ8WTT0 213 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 WBP2Q969T9 261 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 FAM122AQ96E09 287 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 CHFRQ96EP1 664 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 CPXM1Q96SM3 734 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 DDX50Q9BQ39 737 aaKnown RBP16.86■□□□□ 0.29
CD28-203ENST00000458610 MARK1Q9P0L2 795 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 DEC1Q9P2X7 70 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 SFMBT1Q9UHJ3 866 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 CYTH4Q9UIA0 394 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 ZNF318Q5VUA4 2279 aa16.86■□□□□ 0.29
CD28-203ENST00000458610 TEX33O43247 280 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 HSF2BPO75031 334 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 KLKB1P03952 638 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 TPM3P06753 285 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 FERP16591 822 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 GBP1P32455 592 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 OPRD1P41143 372 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 GRIA2P42262 883 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 SLC11A2P49281 568 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 NRLP54845 237 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 TBX4P57082 545 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 CDK17Q00537 523 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 SLC6A3Q01959 620 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 NNTQ13423 1086 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 NR1I3Q14994 352 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 ZNF528Q3MIS6 628 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 TAF3Q5VWG9 929 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 NOP9Q86U38 636 aaKnown RBP16.85■□□□□ 0.29
CD28-203ENST00000458610 TMEM25Q86YD3 366 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 CPXM2Q8N436 756 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 EPS8L1Q8TE68 723 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 DDX1Q92499 740 aaKnown RBP16.85■□□□□ 0.29
CD28-203ENST00000458610 AZIN2Q96A70 460 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 C18orf8Q96DM3 657 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 NUP58Q9BVL2 599 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 BBS2Q9BXC9 721 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 FAM126AQ9BYI3 521 aaPredicted RBP16.85■□□□□ 0.29
CD28-203ENST00000458610 IRX2Q9BZI1 471 aaPredicted RBP16.85■□□□□ 0.29
CD28-203ENST00000458610 EDEM3Q9BZQ6 932 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 RBM12Q9NTZ6 932 aaKnown RBP16.85■□□□□ 0.29
CD28-203ENST00000458610 AGO1Q9UL18 857 aaKnown RBP16.85■□□□□ 0.29
CD28-203ENST00000458610 NAALADL1Q9UQQ1 740 aa16.85■□□□□ 0.29
CD28-203ENST00000458610 COL4A2P08572 1712 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 KMT2EQ8IZD2 1858 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 MYO16Q9Y6X6 1858 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 HELZP42694 1942 aaKnown RBP16.84■□□□□ 0.29
CD28-203ENST00000458610 A0A0A0MRY4 1105 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 EPHB6O15197 1021 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 SCNN1AP37088 669 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 TNFRSF4P43489 277 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 UBASH3AP57075 661 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 FANCCQ00597 558 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 CSTF1Q05048 431 aaKnown RBP16.84■□□□□ 0.29
CD28-203ENST00000458610 MTA1Q13330 715 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 ZC3H14Q6PJT7 736 aaKnown RBP16.84■□□□□ 0.29
CD28-203ENST00000458610 TPGS1Q6ZTW0 290 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 DQX1Q8TE96 717 aaKnown RBP16.84■□□□□ 0.29
CD28-203ENST00000458610 NAP1L5Q96NT1 182 aaPredicted RBP16.84■□□□□ 0.29
CD28-203ENST00000458610 TSPY26PQ9H489 355 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 FBRSL1Q9HCM7 1045 aaKnown RBP16.84■□□□□ 0.29
CD28-203ENST00000458610 ARHGEF4Q9NR80 690 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 RRN3Q9NYV6 651 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 SLC12A6Q9UHW9 1150 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 NOCTQ9UK39 431 aaKnown RBP16.84■□□□□ 0.29
CD28-203ENST00000458610 TLR6Q9Y2C9 796 aa16.84■□□□□ 0.29
CD28-203ENST00000458610 KIF26AQ9ULI4 1882 aaPredicted RBP16.84■□□□□ 0.29
CD28-203ENST00000458610 CHURC1-FNTBB4DL54 471 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 NEDD8-MDP1E9PL57 170 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 KAT7O95251 611 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 EGFP01133 1207 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 FYNP06241 537 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 MMEP08473 750 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 SLC2A3P11169 496 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 TYRP14679 529 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 GABRB2P47870 512 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 NHLH1Q02575 133 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 E2F5Q15329 346 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms