RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 KIF11P52732 1056 aa16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 FKBP3Q00688 224 aaKnown RBP16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 TMEM92Q6UXU6 159 aa16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 HTR3DQ70Z44 454 aa16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 TRMT11Q7Z4G4 463 aaKnown RBP16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 RASSF3Q86WH2 238 aa16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 ETFBKMTQ8IXQ9 262 aa16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 ABCA7Q8IZY2 2146 aa16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 TMEM176AQ96HP8 235 aa16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 GTPBP2Q9BX10 602 aaKnown RBP16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 SLC32A1Q9H598 525 aa16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 NEUROG3Q9Y4Z2 214 aa16.56■□□□□ 0.24
CHCHD3-204ENST00000457942 TRIM49BA6NDI0 452 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 MAP3K13O43283 966 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 TYRP14679 529 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 HNRNPLP14866 589 aaKnown RBP eCLIP16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 KIR2DL1P43626 348 aaPredicted RBP16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 PLA2G4AP47712 749 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 YWHAEP62258 255 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 CBWD6Q4V339 395 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 CBWD3Q5JTY5 395 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 CBWD5Q5RIA9 395 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 ANKRD40Q6AI12 368 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 RSRC2Q7L4I2 434 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 CCDC186Q7Z3E2 898 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 PHTF2Q8N3S3 785 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 TERB1Q8NA31 727 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 SLC4A11Q8NBS3 891 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 TATDN2Q93075 761 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 BHMTQ93088 406 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 FAXDC2Q96IV6 333 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 CDK5RAP1Q96SZ6 601 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 DUSP9Q99956 384 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 NUSAP1Q9BXS6 441 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 GTPBP4Q9BZE4 634 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 TMEM74BQ9NUR3 256 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 WDR35Q9P2L0 1181 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 ARMCX3Q9UH62 379 aaPredicted RBP16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 LAMA5O15230 3695 aa16.55■□□□□ 0.24
CHCHD3-204ENST00000457942 PSMA7O14818 248 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 ZBTB24O43167 697 aaPredicted RBP16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 HMBSP08397 361 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 HOXB2P14652 356 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 CD19P15391 556 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 WASP42768 502 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 RAD23BP54727 409 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 LRRC63Q05C16 580 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 EFEMP1Q12805 493 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 LRMPQ12912 555 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 GOLGA7BQ2TAP0 167 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 ISM2Q6H9L7 571 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 SDE2Q6IQ49 451 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 KLHDC10Q6PID8 442 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 ARHGAP18Q8N392 663 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 CHCHD4Q8N4Q1 142 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 DEFB119Q8N690 84 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 OR2I1PQ8NGU4 316 aa16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 SETXQ7Z333 2677 aaKnown RBP16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 TNRC6BQ9UPQ9 1833 aaKnown RBP16.54■□□□□ 0.24
CHCHD3-204ENST00000457942 A0A0A0MRY4 1105 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 TRIM24O15164 1050 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 ADAM23O75077 832 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 PMS1P54277 932 aaKnown RBP16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 FAM193AP78312 1265 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 LMAN2Q12907 356 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 CUL2Q13617 745 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 CCDC40Q4G0X9 1142 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 COBLL1Q53SF7 1204 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 KLHL10Q6JEL2 608 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 LPCAT2Q7L5N7 544 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 SCD5Q86SK9 330 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 PIGZQ86VD9 579 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 ENGASEQ8NFI3 743 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 ERLEC1Q96DZ1 483 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 CLIC5Q9NZA1 410 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 HESX1Q9UBX0 185 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 MBD1Q9UIS9 605 aaPredicted RBP16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 STRIP2Q9ULQ0 834 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 MSRB2Q9Y3D2 182 aa16.53■□□□□ 0.24
CHCHD3-204ENST00000457942 TAF4O00268 1085 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 CACNG3O60359 315 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 GREM1O60565 184 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 STC2O76061 302 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 ZIC2O95409 532 aaPredicted RBP16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 DGKGP49619 791 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 ATXN3P54252 364 aaPredicted RBP16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 BCAT1P54687 386 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 COG7P83436 770 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 BYSLQ13895 437 aaKnown RBP16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 SGO2Q562F6 1265 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 LYSMD4Q5XG99 296 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 EGFLAMQ63HQ2 1017 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 ARHGAP17Q68EM7 881 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 CHPFQ8IZ52 775 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 KCNV2Q8TDN2 545 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 TIGD1Q96MW7 591 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 FAM124BQ9H5Z6 455 aaPredicted RBP16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 LRRC4Q9HBW1 653 aa16.52■□□□□ 0.24
CHCHD3-204ENST00000457942 PLK2Q9NYY3 685 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms