RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ISCUQ9H1K1 167 aa14.75□□□□□ -0.05
SMPD4-215ENST00000457039 LINC00597Q9H2U6 94 aa14.75□□□□□ -0.05
SMPD4-215ENST00000457039 WNT16Q9UBV4 365 aa14.75□□□□□ -0.05
SMPD4-215ENST00000457039 SH3BP1Q9Y3L3 701 aa14.75□□□□□ -0.05
SMPD4-215ENST00000457039 HBS1LQ9Y450 684 aaKnown RBP14.75□□□□□ -0.05
SMPD4-215ENST00000457039 WNT6Q9Y6F9 365 aa14.75□□□□□ -0.05
SMPD4-215ENST00000457039 A0A087X0T9 212 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 TMCO5BA8MYB1 307 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 GOLGA8SH3BPF8 625 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 SCAMP3O14828 347 aaKnown RBP14.74□□□□□ -0.05
SMPD4-215ENST00000457039 RTN2O75298 545 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 FAM228BP0C875 321 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 ARSAP15289 507 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 NOS2P35228 1153 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 FLT3P36888 993 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 EIF4A3P38919 411 aaKnown RBP14.74□□□□□ -0.05
SMPD4-215ENST00000457039 MATKP42679 507 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 IFNAR2P48551 515 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 TNK2Q07912 1038 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 DCAF6Q58WW2 860 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 PPP1R15BQ5SWA1 713 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 OTUD1Q5VV17 481 aaPredicted RBP14.74□□□□□ -0.05
SMPD4-215ENST00000457039 PHLDB2Q86SQ0 1253 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 VPS36Q86VN1 386 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 DNAAF5Q86Y56 855 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 BBS7Q8IWZ6 715 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 C3orf20Q8ND61 904 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 TTC16Q8NEE8 873 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 PLD4Q96BZ4 506 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 SLC39A13Q96H72 371 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 SERPINB11Q96P15 392 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 NPY6RQ99463 290 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 CHP1Q99653 195 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 DDX23Q9BUQ8 820 aaKnown RBP14.74□□□□□ -0.05
SMPD4-215ENST00000457039 ADAM33Q9BZ11 813 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 EBF3Q9H4W6 596 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 EPHX3Q9H6B9 360 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 METTL5Q9NRN9 209 aaKnown RBP14.74□□□□□ -0.05
SMPD4-215ENST00000457039 ZNHIT6Q9NWK9 470 aaKnown RBP14.74□□□□□ -0.05
SMPD4-215ENST00000457039 DUS2Q9NX74 493 aaKnown RBP14.74□□□□□ -0.05
SMPD4-215ENST00000457039 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMPD4-215ENST00000457039 GTSE1Q9NYZ3 720 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 TBC1D14Q9P2M4 693 aa14.74□□□□□ -0.05
SMPD4-215ENST00000457039 OTOL1A6NHN0 477 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 SHISA7A6NL88 538 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 SLC9A3R1O14745 358 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 IRAK2O43187 625 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 TRUB2O95900 331 aaKnown RBP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 FTLP02792 175 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 HMBSP08397 361 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 RRM1P23921 792 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 KPNA1P52294 538 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 MLLT6P55198 1093 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 RING1Q06587 406 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 RUNX3Q13761 415 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 TRIM67Q6ZTA4 783 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 BNIPLQ7Z465 357 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 ADGRG2Q8IZP9 1017 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 JOSD2Q8TAC2 188 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 ADAM32Q8TC27 787 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 OTUB2Q96DC9 234 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 FCRL2Q96LA5 508 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 HEBP1Q9NRV9 189 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 RRN3Q9NYV6 651 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 CALCOCO1Q9P1Z2 691 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 LSM7Q9UK45 103 aaKnown RBP14.73□□□□□ -0.05
SMPD4-215ENST00000457039 TLR6Q9Y2C9 796 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 COL4A3Q01955 1670 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 TECTAO75443 2155 aa14.73□□□□□ -0.05
SMPD4-215ENST00000457039 TICRRQ7Z2Z1 1910 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 KRBA1A5PL33 1030 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 C2CD4BA6NLJ0 364 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 SIGLEC16A6NMB1 481 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 GJB6O95452 261 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 TFE3P19532 575 aaPredicted RBP14.72□□□□□ -0.05
SMPD4-215ENST00000457039 FECHP22830 423 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 CORO1AP31146 461 aaKnown RBP14.72□□□□□ -0.05
SMPD4-215ENST00000457039 TBX4P57082 545 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 RNASE9P60153 205 aaKnown RBP14.72□□□□□ -0.05
SMPD4-215ENST00000457039 SLC18A3Q16572 532 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 TSR1Q2NL82 804 aaKnown RBP14.72□□□□□ -0.05
SMPD4-215ENST00000457039 ITPRIPL2Q3MIP1 535 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 SLC44A4Q53GD3 710 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 PLEKHA7Q6IQ23 1121 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 FAM217AQ8IXS0 508 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 EMC1Q8N766 993 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 CSGALNACT1Q8TDX6 532 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 ATP2A3Q93084 1043 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 CHFRQ96EP1 664 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 PGAP3Q96FM1 320 aaPredicted RBP14.72□□□□□ -0.05
SMPD4-215ENST00000457039 DCLK3Q9C098 648 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 ECT2Q9H8V3 914 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 NHEJ1Q9H9Q4 299 aaPredicted RBP14.72□□□□□ -0.05
SMPD4-215ENST00000457039 GRPEL1Q9HAV7 217 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 ARHGEF3Q9NR81 526 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 STOML2Q9UJZ1 356 aa14.72□□□□□ -0.05
SMPD4-215ENST00000457039 AGO1Q9UL18 857 aaKnown RBP14.72□□□□□ -0.05
SMPD4-215ENST00000457039 CUL9Q8IWT3 2517 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms