RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 METTL18O95568 372 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 SLC4A1P02730 911 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 FGFR1P11362 822 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 PROZP22891 400 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 EPHB2P29323 1055 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 THPOP40225 353 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 GRM5P41594 1212 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 PSEN2P49810 448 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 SCNN1GP51170 649 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 ALDH18A1P54886 795 aaKnown RBP12.39□□□□□ -0.43
SMPD4-213ENST00000454468 TPI1P60174 286 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 SNX17Q15036 470 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 DTX3LQ8TDB6 740 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 MCRS1Q96EZ8 462 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 ULBP1Q9BZM6 244 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 FBXO6Q9NRD1 293 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-213ENST00000454468 STAP1Q9ULZ2 295 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 USH1CQ9Y6N9 552 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 KRT38O76015 456 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 KRT16P08779 473 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 ESRRAP11474 423 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-213ENST00000454468 NQO1P15559 274 aaKnown RBP12.39□□□□□ -0.43
SMPD4-213ENST00000454468 MGAT1P26572 445 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
SMPD4-213ENST00000454468 CLNS1AP54105 237 aaKnown RBP12.39□□□□□ -0.43
SMPD4-213ENST00000454468 HDAC4P56524 1084 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 ELF3P78545 371 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-213ENST00000454468 SEPT6Q14141 434 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 NOMO1Q15155 1222 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 ZNF792Q3KQV3 632 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 OLFML2BQ68BL8 750 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 PIGWQ7Z7B1 504 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 TP53INP2Q8IXH6 220 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 TMEM174Q8WUU8 243 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 TFB1MQ8WVM0 346 aaKnown RBP12.39□□□□□ -0.43
SMPD4-213ENST00000454468 TMEM109Q9BVC6 243 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 ATXN3LQ9H3M9 355 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 SPC25Q9HBM1 224 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 ZFATQ9P243 1243 aa12.39□□□□□ -0.43
SMPD4-213ENST00000454468 CXorf49A8MYA2 514 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 ADCY6O43306 1168 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 DIAPH2O60879 1101 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 CD4P01730 458 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 DARSP14868 501 aaKnown RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 TYK2P29597 1187 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 YWHAZP63104 245 aaKnown RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 OTOAQ7RTW8 1153 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 LONP2Q86WA8 852 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 CMASQ8NFW8 434 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 CDKL2Q92772 493 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 SERAC1Q96JX3 654 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 PRG3Q9Y2Y8 225 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 IPPQ9Y573 584 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 COL11A1P12107 1806 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 GLTPD2A6NH11 291 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 ARHGAP42A6NI28 874 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 ENO1P06733 434 aaKnown RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 SNRPAP09012 282 aaKnown RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 FAM200BP0CF97 657 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 SOX4Q06945 474 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 MTFR1Q15390 333 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 PPP1R15BQ5SWA1 713 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 B3GALNT2Q8NCR0 500 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 RFWD2Q8NHY2 731 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 STAMBPL1Q96FJ0 436 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 SRPK1Q96SB4 655 aaKnown RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 TXLNGQ9NUQ3 528 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 SENP1Q9P0U3 644 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 NDC80O14777 642 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 HAUS5O94927 633 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 ITGBL1O95965 494 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 HMBSP08397 361 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 ERVK-10P10266 1014 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 HOXA11P31270 313 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 PDK2Q15119 407 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 STILQ15468 1287 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 SV2CQ496J9 727 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 SYPL2Q5VXT5 272 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 HFE2Q6ZVN8 426 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 YTHDF3Q7Z739 585 aaKnown RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 RSPH3Q86UC2 560 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 NAT8LQ8N9F0 302 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 ZNF669Q96BR6 464 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 ACSS3Q9H6R3 686 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 CPSF2Q9P2I0 782 aaKnown RBP12.38□□□□□ -0.43
SMPD4-213ENST00000454468 SLC24A2Q9UI40 661 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 KIAA1257Q9ULG3 409 aa12.38□□□□□ -0.43
SMPD4-213ENST00000454468 FAM237BA0A1B0GVD1 139 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 RNF103O00237 685 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 BEST1O76090 585 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 MYL2P10916 166 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 NCF2P19878 526 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-213ENST00000454468 KCNA4P22459 653 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 PSMB4P28070 264 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 SERPINB3P29508 390 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 NCALDP61601 193 aa12.37□□□□□ -0.43
SMPD4-213ENST00000454468 RPL10AP62906 217 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms