RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CFAP36Q96G28 342 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 KLC4Q9NSK0 619 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 IPPQ9Y573 584 aa12.53□□□□□ -0.4
COL27A1-202ENST00000451716 WDR91A4D1P6 747 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 E7ESA3 106 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 DPYSL4O14531 572 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 UBOX5O94941 541 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 ZBED1O96006 694 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 CYP2F1P24903 491 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 AFF1P51825 1210 aaKnown RBP12.52□□□□□ -0.4
COL27A1-202ENST00000451716 ADAM17P78536 824 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 BST2Q10589 180 aaKnown RBP12.52□□□□□ -0.4
COL27A1-202ENST00000451716 KCNJ11Q14654 390 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 LACTB2Q53H82 288 aaPredicted RBP12.52□□□□□ -0.4
COL27A1-202ENST00000451716 MORN1Q5T089 497 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 CWF19L1Q69YN2 538 aaKnown RBP12.52□□□□□ -0.4
COL27A1-202ENST00000451716 TWF2Q6IBS0 349 aaKnown RBP12.52□□□□□ -0.4
COL27A1-202ENST00000451716 UNC93AQ86WB7 457 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 FAM131BQ86XD5 332 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 APPL2Q8NEU8 664 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 DENND1AQ8TEH3 1009 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 FAM149B1Q96BN6 582 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 RMDN2Q96LZ7 410 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 PITPNM3Q9BZ71 974 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 ACTR5Q9H9F9 607 aaPredicted RBP12.52□□□□□ -0.4
COL27A1-202ENST00000451716 RRAGCQ9HB90 399 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 ETNK2Q9NVF9 386 aa12.52□□□□□ -0.4
COL27A1-202ENST00000451716 BEST1O76090 585 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 PHBP35232 272 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 PDK2Q15119 407 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 CST9Q5W186 159 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 OSTM1Q86WC4 334 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 PARP9Q8IXQ6 854 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 MAB21L3Q8N8X9 362 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 SMG8Q8ND04 991 aaKnown RBP12.52□□□□□ -0.41
COL27A1-202ENST00000451716 TBCBQ99426 244 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 ACSS3Q9H6R3 686 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 NRDE2Q9H7Z3 1164 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
COL27A1-202ENST00000451716 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.52□□□□□ -0.411e-8■□□□□ 8.2
COL27A1-202ENST00000451716 SLC24A2Q9UI40 661 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 MYO18AQ92614 2054 aaKnown RBP12.52□□□□□ -0.41
COL27A1-202ENST00000451716 SCN4AP35499 1836 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 TCRBV9S1A1TA0A576 114 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 AHCYL1O43865 530 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 FAM155BO75949 473 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 SUN1O94901 812 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 FESP07332 822 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 L1CAMP32004 1257 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 MSH2P43246 934 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 NDUFV1P49821 464 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 BCAT1P54687 386 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 HUNKP57058 714 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 LILRA4P59901 499 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 MGAT5Q09328 741 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 SFSWAPQ12872 951 aaKnown RBP12.52□□□□□ -0.41
COL27A1-202ENST00000451716 NR1H3Q13133 447 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 KBTBD12Q3ZCT8 623 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 ARHGAP17Q68EM7 881 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 PRPF39Q86UA1 669 aaKnown RBP12.52□□□□□ -0.41
COL27A1-202ENST00000451716 MFN1Q8IWA4 741 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 ADGRF2Q8IZF7 708 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 NACA2Q9H009 215 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 DNAAF2Q9NVR5 837 aaKnown RBP12.52□□□□□ -0.41
COL27A1-202ENST00000451716 AP4E1Q9UPM8 1137 aa12.52□□□□□ -0.41
COL27A1-202ENST00000451716 MYADML2A6NDP7 307 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 TYROBPO43914 113 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 RARBP10826 455 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 TAF6P49848 677 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 ADIGQ0VDE8 80 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 E2F5Q15329 346 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 TAF1CQ15572 869 aaPredicted RBP12.51□□□□□ -0.41
COL27A1-202ENST00000451716 SLC9A4Q6AI14 798 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 LVRNQ6Q4G3 990 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 PIGZQ86VD9 579 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 CCDC63Q8NA47 563 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 DCAKDQ8WVC6 231 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 KCTD15Q96SI1 283 aaPredicted RBP12.51□□□□□ -0.41
COL27A1-202ENST00000451716 ETNK1Q9HBU6 452 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 MTMR10Q9NXD2 777 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 UTP6Q9NYH9 597 aaKnown RBP12.51□□□□□ -0.41
COL27A1-202ENST00000451716 TIMM13Q9Y5L4 95 aaPredicted RBP12.51□□□□□ -0.41
COL27A1-202ENST00000451716 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.51□□□□□ -0.41
COL27A1-202ENST00000451716 NDC80O14777 642 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 PRPF4O43172 522 aaKnown RBP eCLIP12.51□□□□□ -0.412e-7■■□□□ 13.3
COL27A1-202ENST00000451716 HUS1O60921 280 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 CD4P01730 458 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 GOT1P17174 413 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 AMPD1P23109 780 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 ADRA1DP25100 572 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 PAPOLAP51003 745 aaKnown RBP12.51□□□□□ -0.41
COL27A1-202ENST00000451716 SPARCL1Q14515 664 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 WSCD1Q658N2 575 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 SMYD5Q6GMV2 418 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 ADGRD1Q6QNK2 874 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 SLC26A9Q7LBE3 791 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 FITM2Q8N6M3 262 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 TEKT4Q8WW24 435 aa12.51□□□□□ -0.41
COL27A1-202ENST00000451716 TEX264Q9Y6I9 313 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms