RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PAOXQ6QHF9 649 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 ACOT1Q86TX2 421 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 DGCR14Q96DF8 476 aaKnown RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 HSPBAP1Q96EW2 488 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 AGO4Q9HCK5 861 aaKnown RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 ZNF277Q9NRM2 450 aaPredicted RBP12.78□□□□□ -0.36
UBE3B-204ENST00000449510 CASZ1Q86V15 1759 aa12.78□□□□□ -0.36
UBE3B-204ENST00000449510 NALCNQ8IZF0 1738 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 E5RJQ4 531 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 AMHP03971 560 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 IVDP26440 423 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 MAPK11Q15759 364 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 HHIPL2Q6UWX4 724 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 IGDCC3Q8IVU1 814 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 SP8Q8IXZ3 490 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 KBTBD2Q8IY47 623 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 BANPQ8N9N5 519 aa12.77□□□□□ -0.36
UBE3B-204ENST00000449510 MRPL4Q9BYD3 311 aaKnown RBP12.77□□□□□ -0.36
UBE3B-204ENST00000449510 ADCY6O43306 1168 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 IL1R1P14778 569 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 GRIA1P42261 906 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 AGKQ53H12 422 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 GPR141Q7Z602 305 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 CDKL3Q8IVW4 592 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-204ENST00000449510 RCN3Q96D15 328 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 PHF21BQ96EK2 531 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 C17orf75Q9HAS0 396 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 XPNPEP1Q9NQW7 623 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 RRN3Q9NYV6 651 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 ZNF229Q9UJW7 825 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 STX16-NPEPL1H3BU86 382 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 MAGEB3O15480 346 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 STRNO43815 780 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 THRAP10827 490 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 TGM2P21980 687 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 GTF2BQ00403 316 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 GABPAQ06546 454 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 SIX1Q15475 284 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-204ENST00000449510 CARTPTQ16568 116 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 DCAF6Q58WW2 860 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 XKR3Q5GH77 459 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 EFHC2Q5JST6 749 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 FOXR2Q6PJQ5 311 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 SYTL5Q8TDW5 730 aaPredicted RBP12.77□□□□□ -0.37
UBE3B-204ENST00000449510 FAM198AQ9UFP1 575 aa12.77□□□□□ -0.37
UBE3B-204ENST00000449510 C9JVG2 144 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 TNFAIP8O95379 198 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 NAA20P61599 178 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 GSTA3Q16772 222 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 C16orf89Q6UX73 402 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 SLC9A9Q8IVB4 645 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 GIPC3Q8TF64 312 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 C7orf43Q8WVR3 580 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 ATXN3LQ9H3M9 355 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 DNAAF2Q9NVR5 837 aaKnown RBP12.76□□□□□ -0.37
UBE3B-204ENST00000449510 GNEQ9Y223 722 aaKnown RBP12.76□□□□□ -0.37
UBE3B-204ENST00000449510 IGLV3-22A0A075B6J6 115 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 TMEM191CA6NGB0 347 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 ITM2AO43736 263 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 SIN3BO75182 1162 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 MT-ND1P03886 318 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 GJB1P08034 283 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
UBE3B-204ENST00000449510 CXCL8P10145 99 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 TM4SF1P30408 202 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 SERPINB9P50453 376 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 STAT5BP51692 787 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 TAP1Q03518 808 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 SEL1L3Q68CR1 1132 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 ADGRD1Q6QNK2 874 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 KCNT2Q6UVM3 1135 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 DDHD1Q8NEL9 900 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 PPP1R13LQ8WUF5 828 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 TRAPPC12Q8WVT3 735 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 DCUN1D1Q96GG9 259 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 WNK4Q96J92 1243 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 LENG8Q96PV6 779 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-204ENST00000449510 CIB1Q99828 191 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 EFCAB1Q9HAE3 211 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 IARS2Q9NSE4 1012 aaKnown RBP12.76□□□□□ -0.37
UBE3B-204ENST00000449510 RUVBL2Q9Y230 463 aaKnown RBP12.76□□□□□ -0.37
UBE3B-204ENST00000449510 PLLPQ9Y342 182 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 HBS1LQ9Y450 684 aaKnown RBP12.76□□□□□ -0.37
UBE3B-204ENST00000449510 CLUHO75153 1309 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 H3BSA7 217 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 GLRA3O75311 464 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 SPAG6O75602 509 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 POLBP06746 335 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 FGFR1P11362 822 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 COX4I1P13073 169 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 CDH15P55291 814 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 PCSK7Q16549 785 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 MAP4K3Q8IVH8 894 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-204ENST00000449510 TSPAN14Q8NG11 270 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 GABPB2Q8TAK5 448 aaPredicted RBP12.76□□□□□ -0.37
UBE3B-204ENST00000449510 LMO3Q8TAP4 145 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 AZIN2Q96A70 460 aa12.76□□□□□ -0.37
UBE3B-204ENST00000449510 SDCCAG3Q96C92 435 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms