RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 TYRP14679 529 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 TNFRSF4P43489 277 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 ACADSBP45954 432 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 PXNP49023 591 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 PTK2Q05397 1052 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 TRIP4Q15650 581 aaPredicted RBP13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 SYT13Q7L8C5 426 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 TMEM110Q86TL2 294 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 SLC47A2Q86VL8 602 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 LONP2Q86WA8 852 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 FAM71AQ8IYT1 594 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 CCDC33Q8N5R6 958 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 CCDC26Q8TAB7 109 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 PLD4Q96BZ4 506 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 P2RY11Q96G91 374 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 HBS1LQ9Y450 684 aaKnown RBP13.32□□□□□ -0.28
PRPF40A-203ENST00000448428 TBC1D3BA6NDS4 549 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 MSI1O43347 362 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 CACNG3O60359 315 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 CHKAP35790 457 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 KIR2DL1P43626 348 aaPredicted RBP13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 MRPS21P82921 87 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 MYL5Q02045 173 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 TYRO3Q06418 890 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 SRSF5Q13243 272 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 DMC1Q14565 340 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 NCAPHQ15003 741 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 MSANTD2Q6P1R3 559 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 CAMKK1Q8N5S9 505 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 BHMTQ93088 406 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 XPO6Q96QU8 1125 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 LSM14BQ9BX40 385 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 LHX5Q9H2C1 402 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 EPC1Q9H2F5 836 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 DNAJC17Q9NVM6 304 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 PLK2Q9NYY3 685 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 PCDHGC3Q9UN70 934 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 FHOD1Q9Y613 1164 aa13.31□□□□□ -0.28
PRPF40A-203ENST00000448428 E5RJQ4 531 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 PAPSS1O43252 624 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 CISD3P0C7P0 127 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 UCHL3P15374 230 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 TIE1P35590 1138 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 HARS2P49590 506 aaKnown RBP13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 PDCLQ13371 301 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 RAPGEF1Q13905 1077 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 PREPLQ4J6C6 727 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 FYB2Q5VWT5 728 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 GRAMD4Q6IC98 578 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 WDR5BQ86VZ2 330 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 PASD1Q8IV76 773 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 ALLCQ8N6M5 410 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 IL17RCQ8NAC3 791 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 GOLGA1Q92805 767 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 ACDQ96AP0 544 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 HHIPQ96QV1 700 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 HSD3B7Q9H2F3 369 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 ZDHHC4Q9NPG8 344 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 PLCB1Q9NQ66 1216 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 TJP2Q9UDY2 1190 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 FBXO10Q9UK96 956 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 HCN2Q9UL51 889 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 NAALADL1Q9UQQ1 740 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 VPS13AQ96RL7 3174 aa13.3□□□□□ -0.28
PRPF40A-203ENST00000448428 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 LRRC10BA6NIK2 292 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 PRRT4C9JH25 899 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 SART1O43290 800 aaKnown RBP13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 KLF8O95600 359 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 PENKP01210 267 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 IGLV3-27P01718 113 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 TPM2P07951 284 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 NCAM1P13591 858 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 ZNF18P17022 549 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 CNR2P34972 360 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 KRT9P35527 623 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 KLK7P49862 253 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 COPB1P53618 953 aaKnown RBP13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 BPIFB4P59827 614 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 C10orf76Q5T2E6 689 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 SYPL2Q5VXT5 272 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 CAVIN1Q6NZI2 390 aaKnown RBP13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 TMEM92Q6UXU6 159 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 TOGARAM2Q6ZUX3 1019 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 FAM217AQ8IXS0 508 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 CPXM2Q8N436 756 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 DCLK2Q8N568 766 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 TERB1Q8NA31 727 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 TXNDC5Q8NBS9 432 aaKnown RBP13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 PPP1R13BQ96KQ4 1090 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 CPXM1Q96SM3 734 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 STK33Q9BYT3 514 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 LIMA1Q9UHB6 759 aaKnown RBP13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 MMP17Q9ULZ9 603 aa13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 SMG5Q9UPR3 1016 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms