RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 MED10Q9BTT4 135 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 SLC13A1Q9BZW2 595 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 DTLQ9NZJ0 730 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 TEX264Q9Y6I9 313 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 TTC3P53804 2025 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 CCDC195A0A1B0GUA6 201 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 CCDC78A2IDD5 438 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 KCNK1O00180 336 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 CYB561D2O14569 222 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 MFSD11O43934 449 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 CLCNKBP51801 687 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 NCALDP61601 193 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 ADAM17P78536 824 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 BST2Q10589 180 aaKnown RBP15.35■□□□□ 0.05
SF1-211ENST00000448404 OTUD1Q5VV17 481 aaPredicted RBP15.35■□□□□ 0.05
SF1-211ENST00000448404 RPAINQ86UA6 219 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 TRPV1Q8NER1 839 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 EFR3BQ9Y2G0 817 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 SMIM35A0A1B0GVV1 85 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 RRN3P2A6NIE6 340 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 HUS1O60921 280 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 SUN1O94901 812 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 TFDP2Q14188 446 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 ITIH4Q14624 930 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 BOLA3Q53S33 107 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 MORN1Q5T089 497 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 ZNF449Q6P9G9 518 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 KDM4CQ9H3R0 1056 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 GGA2Q9UJY4 613 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 SLC12A4Q9UP95 1085 aa15.35■□□□□ 0.05
SF1-211ENST00000448404 ATXN2Q99700 1313 aaKnown RBP15.34■□□□□ 0.05
SF1-211ENST00000448404 E7ESA3 106 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 CHUKO15111 745 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 CSH1P0DML2 217 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 CSH2P0DML3 217 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 ELF1P32519 619 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 ABCG1P45844 678 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 TAF6P49848 677 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 PGGT1BP53609 377 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 MTFR1Q15390 333 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 FSCN1Q16658 493 aaKnown RBP15.34■□□□□ 0.05
SF1-211ENST00000448404 GNASQ5JWF2 1037 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 PPP1R21Q6ZMI0 780 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 ZNF534Q76KX8 674 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 OTOAQ7RTW8 1153 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 CEP57Q86XR8 500 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 MAP7D3Q8IWC1 876 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 GSTCDQ8NEC7 633 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 RFWD2Q8NHY2 731 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 ERP27Q96DN0 273 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 AGAP3Q96P47 875 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 MYLK2Q9H1R3 596 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 ZC3H7BQ9UGR2 993 aaKnown RBP15.34■□□□□ 0.05
SF1-211ENST00000448404 BAIAP2L1Q9UHR4 511 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 NUP205Q92621 2012 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 M0QYT0 321 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 TARSP26639 723 aaKnown RBP15.34■□□□□ 0.05
SF1-211ENST00000448404 BCAT1P54687 386 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 SESN2P58004 480 aaPredicted RBP15.34■□□□□ 0.05
SF1-211ENST00000448404 AP1B1Q10567 949 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 LACTB2Q53H82 288 aaPredicted RBP15.34■□□□□ 0.05
SF1-211ENST00000448404 NCBP2-AS2Q69YL0 99 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 CCNYQ8ND76 341 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 ZNF75CPQ92670 426 aaPredicted RBP15.34■□□□□ 0.05
SF1-211ENST00000448404 PLEKHA5Q9HAU0 1116 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 CRTAC1Q9NQ79 661 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 KRT82Q9NSB4 513 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 PIGVQ9NUD9 493 aa15.34■□□□□ 0.05
SF1-211ENST00000448404 SLC15A5A6NIM6 579 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 YJEFN3A6XGL0 299 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 TRIM49D1C9J1S8 452 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 E7ENQ6 273 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 CBX6O95503 412 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 POMCP01189 267 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 SCNN1GP51170 649 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 CAP1Q01518 475 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 MROH9Q5TGP6 573 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 SLC9A4Q6AI14 798 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 CASC4Q6P4E1 433 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 ADGRD1Q6QNK2 874 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 PCGF5Q86SE9 256 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 NME8Q8N427 588 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 LRRC52Q8N7C0 313 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 PDCD7Q8N8D1 485 aaKnown RBP15.33■□□□□ 0.04
SF1-211ENST00000448404 LRRC8CQ8TDW0 803 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 AGO3Q9H9G7 860 aaKnown RBP15.33■□□□□ 0.04
SF1-211ENST00000448404 POPDC2Q9HBU9 364 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 PRKAG3Q9UGI9 489 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 NUDT5Q9UKK9 219 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 ARL2BPQ9Y2Y0 163 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.33■□□□□ 0.04
SF1-211ENST00000448404 CCDC189A1A4V9 331 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 C17orf102A2RUQ5 167 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 KRT16P08779 473 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 USP17L7P0C7H9 530 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 ELF3P78545 371 aaPredicted RBP15.33■□□□□ 0.04
SF1-211ENST00000448404 APBB1IPQ7Z5R6 666 aaPredicted RBP15.33■□□□□ 0.04
SF1-211ENST00000448404 FOXP3Q9BZS1 431 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 ST3GAL5Q9UNP4 418 aa15.33■□□□□ 0.04
SF1-211ENST00000448404 CHKBQ9Y259 395 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms