RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 FAM83HQ6ZRV2 1179 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 RAPH1Q70E73 1250 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 LARP4Q71RC2 724 aaKnown RBP eCLIP4.14□□□□□ -1.75
PMS1-216ENST00000447734 RTL10Q7L3V2 364 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 ADGRG6Q86SQ4 1221 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 LMNTD2Q8IXW0 634 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 THNSL1Q8IYQ7 743 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 TMEFF1Q8IYR6 380 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 NUP93Q8N1F7 819 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 FITM2Q8N6M3 262 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 AGBL5Q8NDL9 886 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 OR8H1Q8NGG4 311 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 SMARCC2Q8TAQ2 1214 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 PPP2R3CQ969Q6 453 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 ZNF653Q96CK0 615 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 SAAL1Q96ER3 474 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 MCRS1Q96EZ8 462 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 ZDHHC12Q96GR4 267 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 REXO5Q96IC2 774 aaKnown RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 ZNF845Q96IR2 970 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 PWWP2AQ96N64 755 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 LENG8Q96PV6 779 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 PPP1R10Q96QC0 940 aaKnown RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 HIST1H2AAQ96QV6 131 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 SMOQ99835 787 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 XPO4Q9C0E2 1151 aaKnown RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 TTYH1Q9H313 450 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 NDST4Q9H3R1 872 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 SERHL2Q9H4I8 314 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 MROH8Q9H579 483 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 PCDHB16Q9NRJ7 776 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 C19orf73Q9NVV2 129 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 BEX4Q9NWD9 120 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 KCND2Q9NZV8 630 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 MRPL15Q9P015 296 aaKnown RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 SLC25A10Q9UBX3 287 aaPredicted RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 VPS51Q9UID3 782 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 YBX2Q9Y2T7 364 aaKnown RBP4.14□□□□□ -1.75
PMS1-216ENST00000447734 KCNE2Q9Y6J6 123 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 FLT1P17948 1338 aa4.14□□□□□ -1.75
PMS1-216ENST00000447734 OR14I1A6ND48 311 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 GAGE10A6NGK3 116 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 SH2D7A6NKC9 451 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 MYO1GB0I1T2 1018 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 PI4K2BG5E9Z4 385 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 POLRMTO00411 1230 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 ABLIM1O14639 778 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 SLC7A4O43246 635 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 HNRNPRO43390 633 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 HNRNPCL1O60812 293 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 HEXIM1O94992 359 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 SLU7O95391 586 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 METTL18O95568 372 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 ALADP13716 330 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 TNNT1P13805 278 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 HGFP14210 728 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 STMN1P16949 149 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 HK1P19367 917 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 KCNA3P22001 575 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 ATP5F1P24539 256 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 RBL1P28749 1068 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 THPOP40225 353 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 HNF4AP41235 474 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 MC3RP41968 323 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 PXNP49023 591 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 PGDP52209 483 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 DGKEP52429 567 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 PPP5CP53041 499 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 RAD23AP54725 363 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 BPIFB3P59826 476 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 RPL7AP62424 266 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 UBXN1Q04323 297 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 EIF2B5Q13144 721 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 CRYMQ14894 314 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 UBXN2BQ14CS0 331 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 ZNF792Q3KQV3 632 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 TTC31Q49AM3 519 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 GAGE13Q4V321 117 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 TCP11X2Q5H9J9 407 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 ATXN7L2Q5T6C5 722 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 GARNL3Q5VVW2 1013 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 OLFML2BQ68BL8 750 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 MSANTD2Q6P1R3 559 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 SLC23A3Q6PIS1 610 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 CMTM4Q8IZR5 234 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 SCML4Q8N228 414 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 FSTL5Q8N475 847 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 ZNF366Q8N895 744 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 PTGR2Q8N8N7 351 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 ANKRD53Q8N9V6 530 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 RFWD2Q8NHY2 731 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 GABPB2Q8TAK5 448 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 NOC3LQ8WTT2 800 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 RUFY2Q8WXA3 655 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 NCSTNQ92542 709 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 CCDC47Q96A33 483 aaKnown RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 ELP4Q96EB1 424 aa4.13□□□□□ -1.75
PMS1-216ENST00000447734 LIN37Q96GY3 246 aaPredicted RBP4.13□□□□□ -1.75
PMS1-216ENST00000447734 ZNF764Q96H86 408 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms