RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 SUSD3Q96L08 255 aa6.18□□□□□ -1.42
PROM1-201ENST00000447510 GAS2L1Q99501 681 aaPredicted RBP6.18□□□□□ -1.42
PROM1-201ENST00000447510 C17orf80Q9BSJ5 609 aa6.18□□□□□ -1.42
PROM1-201ENST00000447510 GPR62Q9BZJ7 368 aa6.18□□□□□ -1.42
PROM1-201ENST00000447510 MIS12Q9H081 205 aa6.18□□□□□ -1.42
PROM1-201ENST00000447510 SLITRK6Q9H5Y7 841 aa6.18□□□□□ -1.42
PROM1-201ENST00000447510 APOBEC3GQ9HC16 384 aaKnown RBP6.18□□□□□ -1.42
PROM1-201ENST00000447510 SIK3Q9Y2K2 1263 aa6.18□□□□□ -1.42
PROM1-201ENST00000447510 PCDHB5Q9Y5E4 795 aa6.18□□□□□ -1.42
PROM1-201ENST00000447510 PCDHA11Q9Y5I1 949 aa6.18□□□□□ -1.42
PROM1-201ENST00000447510 F8W810 466 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 PIK3R2O00459 728 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 FAM189A1O60320 539 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 LRG1P02750 347 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 VDRP11473 427 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 RASSF2P50749 326 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 COG7P83436 770 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 ITIH3Q06033 890 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 ZNF211Q13398 564 aaPredicted RBP6.17□□□□□ -1.42
PROM1-201ENST00000447510 MAP7Q14244 749 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 MEA1Q16626 185 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 LRRC36Q1X8D7 754 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 C1orf220Q5T0J3 134 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 FITM2Q8N6M3 262 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 GBP7Q8N8V2 638 aaPredicted RBP6.17□□□□□ -1.42
PROM1-201ENST00000447510 SAMD11Q96NU1 681 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 GCNAQ96QF7 691 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 ADAM33Q9BZ11 813 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 NKIRAS1Q9NYS0 192 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 RNF14Q9UBS8 474 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 KIAA1257Q9ULG3 409 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 ARL2BPQ9Y2Y0 163 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 COQ4Q9Y3A0 265 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 TET1Q8NFU7 2136 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 LCHNA4D1U4 455 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 FGGP02679 453 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 ITGB1P05556 798 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 SPATA31D3P0C874 917 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 SRGAP2BP0DMP2 458 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 PRLRP16471 622 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 PMS2P54278 862 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 ZBTB16Q05516 673 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 MYBPC3Q14896 1274 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 RCN1Q15293 331 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 LONRF1Q17RB8 773 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 LLGL2Q6P1M3 1020 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 ALKAL1Q6UXT8 129 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 SPATA31D4Q6ZUB0 917 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 TMC3Q7Z5M5 1100 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 UNC93AQ86WB7 457 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 SLC2A14Q8TDB8 520 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 STK32AQ8WU08 396 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 RNF34Q969K3 372 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 HAUS1Q96CS2 278 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 DTNBP1Q96EV8 351 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 RMDN2Q96LZ7 410 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 TXLNGQ9NUQ3 528 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 CTTNBP2NLQ9P2B4 639 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 STK39Q9UEW8 545 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 MYO7AQ13402 2215 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 LINC01553A4QN01 128 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 OR6C75A6NL08 312 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 SPTLC1O15269 473 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 CBX6O95503 412 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 CALCAP01258 141 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 LCP1P13796 627 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 CCDC130P13994 396 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 TYMPP19971 482 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 PBX2P40425 430 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 MAGEA8P43361 318 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 CREMQ03060 361 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 SOWAHAQ2M3V2 549 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 FAM109BQ6ICB4 259 aaPredicted RBP6.17□□□□□ -1.42
PROM1-201ENST00000447510 B3GALNT2Q8NCR0 500 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 GSTCDQ8NEC7 633 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 AGPAT1Q99943 283 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 PITPNM3Q9BZ71 974 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.17□□□□□ -1.42
PROM1-201ENST00000447510 KRT82Q9NSB4 513 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 DPP7Q9UHL4 492 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 CDH9Q9ULB4 789 aa6.17□□□□□ -1.42
PROM1-201ENST00000447510 TMEM120BA0PK00 339 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 SRRM3A6NNA2 597 aaPredicted RBP6.16□□□□□ -1.42
PROM1-201ENST00000447510 SOD2P04179 222 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 RB1P06400 928 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 H2AFZP0C0S5 128 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 FUT4P22083 530 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 BDNFP23560 247 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 TNFRSF8P28908 595 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 VPS41P49754 854 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 RPL10AP62906 217 aaKnown RBP6.16□□□□□ -1.42
PROM1-201ENST00000447510 MTA1Q13330 715 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 ZBTB6Q15916 424 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 ZNF697Q5TEC3 545 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 H2AFVQ71UI9 128 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 SLC47A2Q86VL8 602 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 MAP7D3Q8IWC1 876 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 SLC39A11Q8N1S5 342 aa6.16□□□□□ -1.42
PROM1-201ENST00000447510 PHC3Q8NDX5 983 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms