RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 USP27XA6NNY8 438 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 BTNL10A8MVZ5 291 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 M0QYT0 321 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 MTA2O94776 668 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 MOCS3O95396 460 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 HMBSP08397 361 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 SP100P23497 879 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 DDX6P26196 483 aaKnown RBP eCLIP18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 PTPN9P43378 593 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 ZNF143P52747 638 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 ATXN1P54253 815 aaKnown RBP18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 NAP1L1P55209 391 aaKnown RBP18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 TFF2Q03403 129 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 MESDQ14696 234 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 TCEAL1Q15170 157 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 SLC25A52Q3SY17 297 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 DAB2IPQ5VWQ8 1189 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 TADA2BQ86TJ2 420 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 REXO1L1PQ8IX06 675 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 CMTM8Q8IZV2 173 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 C17orf53Q8N3J3 647 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 ST13P5Q8NFI4 369 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 NECTIN4Q96NY8 510 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 CDK5RAP1Q96SZ6 601 aaKnown RBP18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 CNPY3Q9BT09 278 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 GKN1Q9NS71 199 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 DDIT4Q9NX09 232 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 DNMT3LQ9UJW3 386 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 CDH7Q9ULB5 785 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 STAP1Q9ULZ2 295 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 MYO10Q9HD67 2058 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 MYO1FO00160 1098 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 PRAMEF12O95522 483 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 OLFM2O95897 454 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 IGLV3-25P01717 112 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 IRF1P10914 325 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 GBP2P32456 591 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 NME3Q13232 169 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 LEXMQ3ZCV2 418 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 KLHDC10Q6PID8 442 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 TTC16Q8NEE8 873 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 ZSCAN18Q8TBC5 510 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 FAM172AQ8WUF8 416 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 NT5C3BQ969T7 300 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 WBP2Q969T9 261 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 KLF16Q9BXK1 252 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 TSGA10Q9BZW7 698 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 GOLPH3Q9H4A6 298 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 RRN3Q9NYV6 651 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 IP6K2Q9UHH9 426 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 USTQ9Y2C2 406 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 CPQQ9Y646 472 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 MYOFQ9NZM1 2061 aa18.75■□□□□ 0.59
TRAPPC4-203ENST00000447216 SPTBN5Q9NRC6 3674 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 TCF20Q9UGU0 1960 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 IRAK2O43187 625 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 ZSCAN12O43309 604 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 KRT86O43790 486 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 BUB1BO60566 1050 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 AVPR1AP37288 418 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 HADHBP55084 474 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 SLC7A9P82251 487 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 ZXDBP98169 803 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 DEUP1Q05D60 604 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 ARHGAP29Q52LW3 1261 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 HS1BP3Q53T59 392 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 ARID3BQ8IVW6 561 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 CCAR2Q8N163 923 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 TPCN2Q8NHX9 752 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 FNIP1Q8TF40 1166 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 ZFRQ96KR1 1074 aaKnown RBP18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 SERPINB11Q96P15 392 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 PIGVQ9NUD9 493 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 CCL26Q9Y258 94 aa18.74■□□□□ 0.59
TRAPPC4-203ENST00000447216 XIRP2A4UGR9 3374 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 PROSCO94903 275 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 PFKLP17858 780 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 KCNQ1P51787 676 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 HDAC4P56524 1084 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 TBX4P57082 545 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 TRIP4Q15650 581 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 FAM78AQ5JUQ0 283 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 PTCRAQ6ISU1 281 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 ZNF662Q6ZS27 426 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 BNIPLQ7Z465 357 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 ARFGAP1Q8N6T3 406 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 ADAMTS19Q8TE59 1207 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 CENPIQ92674 756 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 USP13Q92995 863 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 GDE1Q9NZC3 331 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 HYOU1Q9Y4L1 999 aa18.73■□□□□ 0.59
TRAPPC4-203ENST00000447216 GRID2IPA4D2P6 1211 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 SOBPA7XYQ1 873 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 SCAMP3O14828 347 aaKnown RBP18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 GBP1P32455 592 aa18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 RDXP35241 583 aaKnown RBP18.72■□□□□ 0.59
TRAPPC4-203ENST00000447216 VIPR2P41587 438 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms