RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PRKCIP41743 596 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 FAM83EQ2M2I3 478 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 ELMSAN1Q6PJG2 1045 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 C19orf18Q8NEA5 215 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 SLC35C1Q96A29 364 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 UBE2OQ9C0C9 1292 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 CACYBPQ9HB71 228 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 DNPEPQ9ULA0 475 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TCRBV7S2A1N4TA0A589 114 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 RBM47A0AV96 593 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 MYL4P12829 197 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 DPYSL3Q14195 570 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 ASTE1Q2TB18 679 aaPredicted RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 ARL13BQ3SXY8 428 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 PAGE2Q7Z2X7 111 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 CENPLQ8N0S6 344 aaPredicted RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 C4orf32Q8N8J7 132 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 ACSS3Q9H6R3 686 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 HEG1Q9ULI3 1381 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 PSMD12O00232 456 aaPredicted RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 H3BSA7 217 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 MAGEB2O15479 319 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 ADGRE1Q14246 886 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 COG2Q14746 738 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 USP31Q70CQ4 1352 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 FAXCQ5TGI0 409 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 SLCO6A1Q86UG4 719 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 ABRAQ8N0Z2 381 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 AGBL1Q96MI9 1066 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 ZNF232Q9UNY5 417 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 INO80B-WBP1J3KQ70 363 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 CNTFP26441 200 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PLEKHO2Q8TD55 490 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 INO80BQ9C086 356 aaPredicted RBP8.09□□□□□ -1.11
SMG1-202ENST00000446231 STN1Q9H668 368 aaKnown RBP8.09□□□□□ -1.11
SMG1-202ENST00000446231 SUSD4Q5VX71 490 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 DCUN1D1Q96GG9 259 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 ELMO2Q96JJ3 720 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 ANKRD6Q9Y2G4 727 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 SIN3BO75182 1162 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 GPD1LQ8N335 351 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 SUN5Q8TC36 379 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 C10orf82Q8WW14 230 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 SLITRK1Q96PX8 696 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 CROTQ9UKG9 612 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PDGFRAP16234 1089 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 ACADVLP49748 655 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 CBWD1Q9BRT8 395 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 LRRC4CQ9HCJ2 640 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG1-202ENST00000446231 LOC100506127A0A0U1RQW1 187 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 OR52E8Q6IFG1 317 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 ZDHHC24Q6UX98 284 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 MTERF3Q96E29 417 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 A0A0B4J269 797 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 UBDO15205 165 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 LIASO43766 372 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 IL12AP29459 219 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 FUT11Q495W5 492 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 CBWD2Q8IUF1 395 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 C7orf31Q8N865 590 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PWWP2AQ96N64 755 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 MSH4O15457 936 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PTGS2P35354 604 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 SLC10A5Q5PT55 438 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 CENPSQ8N2Z9 138 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 RNF148Q8N7C7 305 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 CDHR1Q96JP9 859 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 JCADQ9P266 1359 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PRR23D1E9PI22 279 aaPredicted RBP8.09□□□□□ -1.11
SMG1-202ENST00000446231 ZNF862O60290 1169 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PRR23D2P0DMB1 279 aaPredicted RBP8.09□□□□□ -1.11
SMG1-202ENST00000446231 BCAP31P51572 246 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 SLC12A3P55017 1021 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 KCNK10P57789 538 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 SEPT8Q92599 483 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PHF12Q96QT6 1004 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 AGO2Q9UKV8 859 aaKnown RBP8.09□□□□□ -1.11
SMG1-202ENST00000446231 UGGT1Q9NYU2 1555 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 NPR1P16066 1061 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 CCND2P30279 289 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 HK2P52789 917 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 DLG1Q12959 904 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 SQLEQ14534 574 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 ERFEQ4G0M1 354 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 TTC30BQ8N4P2 665 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 RP9Q8TA86 221 aaKnown RBP8.09□□□□□ -1.11
SMG1-202ENST00000446231 PPP1R10Q96QC0 940 aaKnown RBP8.09□□□□□ -1.11
SMG1-202ENST00000446231 MINPP1Q9UNW1 487 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 AP3M2P53677 418 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PSMC6P62333 389 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PID1Q7Z2X4 250 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 ERLEC1Q96DZ1 483 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 RPS6KL1Q9Y6S9 549 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 VAC14Q08AM6 782 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 NAB1Q13506 487 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 PDSS2Q86YH6 399 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 SMYD1Q8NB12 490 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 MAGEB5Q9BZ81 275 aa8.09□□□□□ -1.11
SMG1-202ENST00000446231 TCRBV5S4A2TA0A5A2 114 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms