RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PLK2Q9NYY3 685 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 INVSQ9Y283 1065 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 YJEFN3A6XGL0 299 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 E7ENQ6 273 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 PIK3R2O00459 728 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 SDHBP21912 280 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 TGM1P22735 817 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 HARS2P49590 506 aaKnown RBP21.01■□□□□ 0.95
LRCH3-208ENST00000443727 DGKGP49619 791 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 ZNF132P52740 706 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 MFAP3P55082 362 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 PUM1Q14671 1186 aaKnown RBP eCLIP21.01■□□□□ 0.95
LRCH3-208ENST00000443727 SDE2Q6IQ49 451 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 PMF1Q6P1K2 205 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 TMEM92Q6UXU6 159 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 GBP6Q6ZN66 633 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 ENOSF1Q7L5Y1 443 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 FMNL3Q8IVF7 1028 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 SLC35F5Q8WV83 523 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 PLD4Q96BZ4 506 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 ZSWIM1Q9BR11 485 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 ABCC13Q9NSE7 274 aa21.01■□□□□ 0.95
LRCH3-208ENST00000443727 CDV3Q9UKY7 258 aaKnown RBP21.01■□□□□ 0.95
LRCH3-208ENST00000443727 AGO1Q9UL18 857 aaKnown RBP21.01■□□□□ 0.95
LRCH3-208ENST00000443727 DCLK1O15075 740 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 RHOBTB1O94844 696 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 CYBBP04839 570 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 USP8P40818 1118 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 DAOAP59103 153 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 CSRP2Q16527 193 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 BHLHA9Q7RTU4 235 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 PGBD3Q8N328 593 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 HMGB4Q8WW32 186 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 FAM81BQ96LP2 452 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 ARRDC1-AS1Q9H2J1 176 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 DACH1Q9UI36 760 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 CEP250Q9BV73 2442 aa21■□□□□ 0.95
LRCH3-208ENST00000443727 TCRBV21S2A2A0A5A6 115 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 ZBTB24O43167 697 aaPredicted RBP20.99■□□□□ 0.95
LRCH3-208ENST00000443727 MED7O43513 233 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 ADAM23O75077 832 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 PLK5Q496M5 336 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 TRIM65Q6PJ69 517 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 TOGARAM2Q6ZUX3 1019 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 DGLUCYQ7Z3D6 616 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 C11orf74Q86VG3 221 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 RASSF3Q86WH2 238 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 FAM114A1Q8IWE2 563 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 CHPFQ8IZ52 775 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 SCML4Q8N228 414 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 MDGA1Q8NFP4 955 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 IRGQQ8WZA9 623 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 ZC3H10Q96K80 434 aaKnown RBP20.99■□□□□ 0.95
LRCH3-208ENST00000443727 HSFY1Q96LI6 401 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 MED15Q96RN5 788 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 ST7Q9NRC1 585 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 SFMBT1Q9UHJ3 866 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 HBS1LQ9Y450 684 aaKnown RBP20.99■□□□□ 0.95
LRCH3-208ENST00000443727 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.99■□□□□ 0.95
LRCH3-208ENST00000443727 KIAA1549LQ6ZVL6 1849 aa20.99■□□□□ 0.95
LRCH3-208ENST00000443727 SDK1Q7Z5N4 2213 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 FOXD2O60548 495 aaPredicted RBP20.98■□□□□ 0.95
LRCH3-208ENST00000443727 FBXO21O94952 628 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 LETM1O95202 739 aaPredicted RBP20.98■□□□□ 0.95
LRCH3-208ENST00000443727 EPN2O95208 641 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 HNRNPLP14866 589 aaKnown RBP eCLIP20.98■□□□□ 0.95
LRCH3-208ENST00000443727 NTSR1P30989 418 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 WASP42768 502 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 EXOC3L4Q17RC7 722 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 DPCR1Q3MIW9 517 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 EGFLAMQ63HQ2 1017 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 PRR23CQ6ZRP0 262 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 ERMP1Q7Z2K6 904 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 DDI1Q8WTU0 396 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 MIS12Q9H081 205 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 THAP9Q9H5L6 903 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 CNTN6Q9UQ52 1028 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 STARD13Q9Y3M8 1113 aa20.98■□□□□ 0.95
LRCH3-208ENST00000443727 DMXL1Q9Y485 3027 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 THAP12O43422 761 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 PENKP01210 267 aaPredicted RBP20.97■□□□□ 0.95
LRCH3-208ENST00000443727 CHRM1P11229 460 aaPredicted RBP20.97■□□□□ 0.95
LRCH3-208ENST00000443727 HOXB2P14652 356 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 SLC9A1P19634 815 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 FOXK2Q01167 660 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 TRIP4Q15650 581 aaPredicted RBP20.97■□□□□ 0.95
LRCH3-208ENST00000443727 CCDC6Q16204 474 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 ARHGAP44Q17R89 818 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 GJB7Q6PEY0 223 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 IRF2BP1Q8IU81 584 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 C12orf50Q8NA57 414 aaPredicted RBP20.97■□□□□ 0.95
LRCH3-208ENST00000443727 SPACA7Q96KW9 195 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 DUSP15Q9H1R2 295 aaPredicted RBP20.97■□□□□ 0.95
LRCH3-208ENST00000443727 DLL3Q9NYJ7 618 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 APEX2Q9UBZ4 518 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 PCDHGA5Q9Y5G8 931 aa20.97■□□□□ 0.95
LRCH3-208ENST00000443727 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.96■□□□□ 0.95
LRCH3-208ENST00000443727 PRRT4C9JH25 899 aa20.96■□□□□ 0.95
LRCH3-208ENST00000443727 MAP3K13O43283 966 aa20.96■□□□□ 0.95
LRCH3-208ENST00000443727 MSI1O43347 362 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms