RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ERBB2P04626 1255 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 CYP17A1P05093 508 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 CHRNB2P17787 502 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 CHKAP35790 457 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 EIF2DP41214 584 aaKnown RBP15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 SLC6A3Q01959 620 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 GAD2Q05329 585 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 RING1Q06587 406 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 FZD5Q13467 585 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 DGKKQ5KSL6 1271 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 OR6B2Q6IFH4 312 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 RHBDF2Q6PJF5 856 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 SLC26A9Q7LBE3 791 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 IRF2BP2Q7Z5L9 587 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 SYNPOQ8N3V7 929 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 SLC20A1Q8WUM9 679 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 CHFRQ96EP1 664 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 SERPINB11Q96P15 392 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 NUCKS1Q9H1E3 243 aaKnown RBP15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 SPHK2Q9NRA0 654 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 TJP2Q9UDY2 1190 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 SFMBT1Q9UHJ3 866 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 HCN4Q9Y3Q4 1203 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 MTF2Q9Y483 593 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 ARIH1Q9Y4X5 557 aaPredicted RBP15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 ITIH6Q6UXX5 1313 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 LRRC53A6NM62 1247 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 IGLV3-27P01718 113 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 UNGP13051 313 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 CORO1AP31146 461 aaKnown RBP15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 HARS2P49590 506 aaKnown RBP15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 ARID5AQ03989 594 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 LRRC32Q14392 662 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 TMEM196Q5HYL7 178 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 SFMBT2Q5VUG0 894 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 NUGGCQ68CJ6 796 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 TXNDC11Q6PKC3 985 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 OLFML1Q6UWY5 402 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 FAM183BPQ6ZVS7 135 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 UNC45BQ8IWX7 931 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 CPXM2Q8N436 756 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 CD101Q93033 1021 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 AZIN2Q96A70 460 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 SLC2A13Q96QE2 648 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 AGPAT1Q99943 283 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 XPO4Q9C0E2 1151 aaKnown RBP15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 TMEM51Q9NW97 253 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 MARK1Q9P0L2 795 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 NDRG2Q9UN36 371 aaKnown RBP15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 NAALADL1Q9UQQ1 740 aa15.69■□□□□ 0.1
CSNK1E-210ENST00000442216 HOXC11O43248 304 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 KLKB1P03952 638 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 DCNP07585 359 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 CHRNB1P11230 501 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 ADH5P11766 374 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 DRD1P21728 446 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 PRKCIP41743 596 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 CENPCQ03188 943 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 GRSF1Q12849 480 aaKnown RBP eCLIP15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 CCINQ13939 588 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 PON2Q15165 354 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 GAB4Q2WGN9 574 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 LY6G5CQ5SRR4 150 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 SYPL2Q5VXT5 272 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 NAA35Q5VZE5 725 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 PPP1R2P3Q6NXS1 205 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 MAMSTRQ6ZN01 415 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 ARCQ7LC44 396 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 FAM217AQ8IXS0 508 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 RNF214Q8ND24 703 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 DQX1Q8TE96 717 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 CPA5Q8WXQ8 436 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 SYN2Q92777 582 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 PIWIL1Q96J94 861 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 P2RY13Q9BPV8 354 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 IRX2Q9BZI1 471 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 RRN3Q9NYV6 651 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 WDR35Q9P2L0 1181 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 STOML2Q9UJZ1 356 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 TLR6Q9Y2C9 796 aa15.68■□□□□ 0.1
CSNK1E-210ENST00000442216 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.68■□□□□ 0.12e-6■■□□□ 12.5
CSNK1E-210ENST00000442216 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 SCAMP3O14828 347 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 GALR2O43603 387 aaPredicted RBP15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 DAB1O75553 588 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 IGLV3-25P01717 112 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 HMBSP08397 361 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 MMP8P22894 467 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 NOS2P35228 1153 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 OPRD1P41143 372 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 GALK1P51570 392 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 GSCP56915 257 aaPredicted RBP15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 TBX4P57082 545 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 ASIC2Q16515 512 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 CLEC16AQ2KHT3 1053 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 FBXO43Q4G163 708 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 PREPLQ4J6C6 727 aaPredicted RBP15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 XYLT1Q86Y38 959 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 DENND1CQ8IV53 801 aa15.67■□□□□ 0.1
CSNK1E-210ENST00000442216 DEFB106AQ8N104 65 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms