RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 RNF139Q8WU17 664 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 CPT1BQ92523 772 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 FUBP3Q96I24 572 aaKnown RBP eCLIP13.67□□□□□ -0.22
CPSF4-206ENST00000441580 ADAM33Q9BZ11 813 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 KLC2Q9H0B6 622 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 TBC1D13Q9NVG8 400 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 MTMR10Q9NXD2 777 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 CWC15Q9P013 229 aaKnown RBP13.67□□□□□ -0.22
CPSF4-206ENST00000441580 SAE1Q9UBE0 346 aaPredicted RBP13.67□□□□□ -0.22
CPSF4-206ENST00000441580 LGALS13Q9UHV8 139 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 SLC12A6Q9UHW9 1150 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 TRIM17Q9Y577 477 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 PLXNA3P51805 1871 aa13.67□□□□□ -0.22
CPSF4-206ENST00000441580 E7ESA3 106 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 PPP1R12AO14974 1030 aaPredicted RBP13.66□□□□□ -0.22
CPSF4-206ENST00000441580 KCNN4O15554 427 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 CDH16O75309 829 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 STK10O94804 968 aaKnown RBP13.66□□□□□ -0.22
CPSF4-206ENST00000441580 MDH1P40925 334 aaKnown RBP13.66□□□□□ -0.22
CPSF4-206ENST00000441580 MAGEA6P43360 314 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 ATP1A2P50993 1020 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 NR1H3Q13133 447 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 NFE2Q16621 373 aaPredicted RBP13.66□□□□□ -0.22
CPSF4-206ENST00000441580 PLEKHG4Q58EX7 1191 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 TNFAIP8L3Q5GJ75 292 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 NCBP2-AS2Q69YL0 99 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 PM20D1Q6GTS8 502 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 PDZD4Q76G19 769 aaPredicted RBP13.66□□□□□ -0.22
CPSF4-206ENST00000441580 GPRIN1Q7Z2K8 1008 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 PRUNE1Q86TP1 453 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 ZC3H18Q86VM9 953 aaKnown RBP13.66□□□□□ -0.22
CPSF4-206ENST00000441580 PDIK1LQ8N165 341 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 HASPINQ8TF76 798 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 OLFM3Q96PB7 478 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 PAK6Q9NQU5 681 aaPredicted RBP13.66□□□□□ -0.22
CPSF4-206ENST00000441580 ARHGEF4Q9NR80 690 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 DNAJC17Q9NVM6 304 aaKnown RBP13.66□□□□□ -0.22
CPSF4-206ENST00000441580 FETUBQ9UGM5 382 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 HEY1Q9Y5J3 304 aa13.66□□□□□ -0.22
CPSF4-206ENST00000441580 SMIM23A6NLE4 172 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 YJEFN3A6XGL0 299 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 E7ENQ6 273 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 EEF2KO00418 725 aaKnown RBP13.65□□□□□ -0.22
CPSF4-206ENST00000441580 NRP1O14786 923 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 TRIM66O15016 1216 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 ALOX15BO15296 676 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 SPAG6O75602 509 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 OAZ2O95190 189 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 NCAM1P13591 858 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 ATP2A2P16615 1042 aaKnown RBP13.65□□□□□ -0.22
CPSF4-206ENST00000441580 BDNFP23560 247 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 IGFBP6P24592 240 aaPredicted RBP13.65□□□□□ -0.22
CPSF4-206ENST00000441580 CYP2C18P33260 490 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 HTR7P34969 479 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 NDUFV1P49821 464 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 ATXN1P54253 815 aaKnown RBP13.65□□□□□ -0.22
CPSF4-206ENST00000441580 CACNA2D1P54289 1103 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 ELAVL2Q12926 359 aaKnown RBP13.65□□□□□ -0.22
CPSF4-206ENST00000441580 PDIA2Q13087 525 aaKnown RBP13.65□□□□□ -0.22
CPSF4-206ENST00000441580 CBLBQ13191 982 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 AUHQ13825 339 aaKnown RBP13.65□□□□□ -0.22
CPSF4-206ENST00000441580 KCNJ11Q14654 390 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 KYNUQ16719 465 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 HEATR6Q6AI08 1181 aaKnown RBP13.65□□□□□ -0.22
CPSF4-206ENST00000441580 ZNF280DQ6N043 979 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 BHLHA9Q7RTU4 235 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 TDRPQ86YL5 185 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 ZBED8Q8IZ13 594 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 C9orf72Q96LT7 481 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 ZCWPW1Q9H0M4 648 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 PIGVQ9NUD9 493 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 DDIT4Q9NX09 232 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 XPO7Q9UIA9 1087 aaKnown RBP13.65□□□□□ -0.22
CPSF4-206ENST00000441580 LRFN2Q9ULH4 789 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 ACTL7BQ9Y614 415 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 SRCAPQ6ZRS2 3230 aa13.65□□□□□ -0.22
CPSF4-206ENST00000441580 EXOC1LA0A1B0GW35 172 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 TLDC2A0PJX2 215 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 ERICH4A6NGS2 130 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 OR6C75A6NL08 312 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 TMEM63AO94886 807 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 ITGB1P05556 798 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 USP17L7P0C7H9 530 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 GOT1P17174 413 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 TPSB2P20231 275 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 LSP1P33241 339 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 SERPINB6P35237 376 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 MMP13P45452 471 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 OR1G1P47890 313 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 HCAR3P49019 387 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 IRAK1P51617 712 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 TPI1P60174 286 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 NME3Q13232 169 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 DPYSQ14117 519 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 PAFAH1B3Q15102 231 aaKnown RBP13.64□□□□□ -0.23
CPSF4-206ENST00000441580 PDK1Q15118 436 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 RASA2Q15283 850 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 TPSAB1Q15661 275 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 LONRF1Q17RB8 773 aa13.64□□□□□ -0.23
CPSF4-206ENST00000441580 KLHL38Q2WGJ6 581 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms