RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SPTBN2O15020 2390 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 TET1Q8NFU7 2136 aa9.52□□□□□ -0.89
HDAC6-209ENST00000440653 TREHO43280 583 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 MBTPS2O43462 519 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 TRAPPC3O43617 180 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 SPAG6O75602 509 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 ACSL3O95573 720 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 SHBGP04278 402 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 PFKMP08237 780 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 KCNA4P22459 653 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 IL1R2P27930 398 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 STIP1P31948 543 aaKnown RBP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 VPS41P49754 854 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 AIF1P55008 147 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 CDH6P55285 790 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 ARL4CP56559 192 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 GUCY1A3Q02108 690 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 DLX2Q07687 328 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 GPS1Q13098 491 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 ORC1Q13415 861 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 ITGA7Q13683 1181 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 DPYSL3Q14195 570 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 PUM1Q14671 1186 aaKnown RBP eCLIP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 HIF1AQ16665 826 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 SOWAHAQ2M3V2 549 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 SMTNL2Q2TAL5 461 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 TCEAL5Q5H9L2 206 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 EFHC1Q5JVL4 640 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 PPP1R26Q5T8A7 1209 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 CXCL17Q6UXB2 119 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 STRADAQ7RTN6 431 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 SRLQ86TD4 932 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 ACOT1Q86TX2 421 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 NLRP14Q86W24 1093 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 FAM228AQ86W67 206 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 KIAA2013Q8IYS2 634 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 EMC1Q8N766 993 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 MYCBPAPQ8TBZ2 947 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 EPS8L3Q8TE67 593 aaKnown RBP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 SLC35F5Q8WV83 523 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 KBTBD7Q8WVZ9 684 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 TMEM40Q8WWA1 233 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 RXFP2Q8WXD0 754 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 PRCCQ92733 491 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 FAF2Q96CS3 445 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 RTP4Q96DX8 246 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 PPP1R10Q96QC0 940 aaKnown RBP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 RBM15Q96T37 977 aaKnown RBP eCLIP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 SELENOSQ9BQE4 189 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 CALN1Q9BXU9 219 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 MAK16Q9BXY0 300 aaKnown RBP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 CLDND1Q9NY35 253 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 TJP2Q9UDY2 1190 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 STAP1Q9ULZ2 295 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 FARP1Q9Y4F1 1045 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-209ENST00000440653 CLUHO75153 1309 aa9.51□□□□□ -0.89
HDAC6-209ENST00000440653 PTPRDP23468 1912 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 MYO7AQ13402 2215 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 LINC01553A4QN01 128 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 C5orf60A6NFR6 353 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 E7EVH7 732 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 APOL1O14791 398 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 KIAA0754O94854 1291 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 FBXO21O94952 628 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 SKIP12755 728 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 CHKAP35790 457 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 MAGEA4P43358 317 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 ZNF135P52742 658 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 EIF3EP60228 445 aaKnown RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 PLCB3Q01970 1234 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 PDE4CQ08493 712 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 SIGLEC14Q08ET2 396 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 CBLBQ13191 982 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 AUHQ13825 339 aaKnown RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 COL19A1Q14993 1142 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 TRIP13Q15645 432 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 DPYSL2Q16555 572 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 KLHL38Q2WGJ6 581 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 GLRA4Q5JXX5 417 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 SLC9A4Q6AI14 798 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 TXNRD3NBQ6F5E7 133 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 FAM43BQ6ZT52 329 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 CYP4V2Q6ZWL3 525 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 BZW1Q7L1Q6 419 aaKnown RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 ANKS1BQ7Z6G8 1248 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 YTHDF3Q7Z739 585 aaKnown RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 SERINC5Q86VE9 423 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 ARFGAP1Q8N6T3 406 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 B3GALNT2Q8NCR0 500 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 UBA3Q8TBC4 463 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 FAM172AQ8WUF8 416 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 HSPH1Q92598 858 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 C18orf25Q96B23 403 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 TGS1Q96RS0 853 aaKnown RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 HNRNPABQ99729 332 aaKnown RBP9.5□□□□□ -0.89
HDAC6-209ENST00000440653 FERMT1Q9BQL6 677 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 C17orf80Q9BSJ5 609 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 TRIM62Q9BVG3 475 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 APOL6Q9BWW8 343 aa9.5□□□□□ -0.89
HDAC6-209ENST00000440653 FAM49BQ9NUQ9 324 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms