RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 TPK1Q9H3S4 243 aa14.17□□□□□ -0.14
LINC02048-201ENST00000440556 LIN28AQ9H9Z2 209 aaKnown RBP14.17□□□□□ -0.14
LINC02048-201ENST00000440556 MRPL40Q9NQ50 206 aaKnown RBP14.17□□□□□ -0.14
LINC02048-201ENST00000440556 HACD3Q9P035 362 aa14.17□□□□□ -0.14
LINC02048-201ENST00000440556 DOLKQ9UPQ8 538 aa14.17□□□□□ -0.14
LINC02048-201ENST00000440556 DNAJC16Q9Y2G8 782 aa14.17□□□□□ -0.14
LINC02048-201ENST00000440556 TEX264Q9Y6I9 313 aa14.17□□□□□ -0.14
LINC02048-201ENST00000440556 IGKV6D-41A0A0C4DH26 115 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 MSH4O15457 936 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 SNAP91O60641 907 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 RFPL1O75677 317 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 CYP3A4P08684 503 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 ALOX5P09917 674 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 PABPC1P11940 636 aaKnown RBP14.16□□□□□ -0.14
LINC02048-201ENST00000440556 KRT10P13645 584 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 ZNF26P17031 533 aaPredicted RBP14.16□□□□□ -0.14
LINC02048-201ENST00000440556 CRKLP46109 303 aaKnown RBP14.16□□□□□ -0.14
LINC02048-201ENST00000440556 GABRB2P47870 512 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 MAMLD1Q13495 774 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 ANKDD1AQ495B1 522 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 ANKRD22Q5VYY1 191 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 SPOPLQ6IQ16 392 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 MFSD7Q6UXD7 560 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 BNC2Q6ZN30 1099 aaPredicted RBP14.16□□□□□ -0.14
LINC02048-201ENST00000440556 HAUS6Q7Z4H7 955 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 PHF13Q86YI8 300 aaPredicted RBP14.16□□□□□ -0.14
LINC02048-201ENST00000440556 COLGALT2Q8IYK4 626 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 TMEM102Q8N9M5 508 aaPredicted RBP14.16□□□□□ -0.14
LINC02048-201ENST00000440556 PCYOX1LQ8NBM8 494 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 FBXL13Q8NEE6 735 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 WRNIP1Q96S55 665 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 WDR83Q9BRX9 315 aaKnown RBP14.16□□□□□ -0.14
LINC02048-201ENST00000440556 TMEM121Q9BTD3 319 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 C1orf50Q9BV19 199 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 CAAP1Q9H8G2 361 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 COPS7BQ9H9Q2 264 aaPredicted RBP14.16□□□□□ -0.14
LINC02048-201ENST00000440556 CD209Q9NNX6 404 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 HOMER2Q9NSB8 354 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 HSPBP1Q9NZL4 362 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 DKK3Q9UBP4 350 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 TTLL3Q9Y4R7 772 aa14.16□□□□□ -0.14
LINC02048-201ENST00000440556 FOCADQ5VW36 1801 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 LOC102724428A0A0B4J2F2 783 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L15C9J2P7 530 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L13C9JLJ4 530 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L11C9JVI0 530 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L18D6R9N7 530 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L22D6RA61 530 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L17D6RBQ6 530 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L19D6RCP7 530 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 CFAP99D6REC4 459 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L20D6RJB6 530 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 XPO1O14980 1071 aaKnown RBP14.15□□□□□ -0.14
LINC02048-201ENST00000440556 TLR3O15455 904 aaKnown RBP14.15□□□□□ -0.14
LINC02048-201ENST00000440556 XPOTO43592 962 aaKnown RBP14.15□□□□□ -0.14
LINC02048-201ENST00000440556 SORBS2O94875 1100 aaKnown RBP14.15□□□□□ -0.14
LINC02048-201ENST00000440556 POLR2EP19388 210 aaKnown RBP14.15□□□□□ -0.14
LINC02048-201ENST00000440556 DCKP27707 260 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 RPL22P35268 128 aaKnown RBP14.15□□□□□ -0.14
LINC02048-201ENST00000440556 ELK3P41970 407 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 SLC1A6P48664 564 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 PCYT1AP49585 367 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 CCT8P50990 548 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 SIK1P57059 783 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 YWHAGP61981 247 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L24Q0WX57 530 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 ZFYVE27Q5T4F4 411 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 EGFLAMQ63HQ2 1017 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 NANOGP8Q6NSW7 305 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 C16orf46Q6P387 395 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USP17L6PQ6QN14 398 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 FRMD7Q6ZUT3 714 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 EEPD1Q7L9B9 569 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 UBR7Q8N806 425 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 TMC2Q8TDI7 906 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 ACMSDQ8TDX5 336 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 BCAS3Q9H6U6 928 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 ZNRF3Q9ULT6 936 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 USTQ9Y2C2 406 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 SNX9Q9Y5X1 595 aa14.15□□□□□ -0.14
LINC02048-201ENST00000440556 CCDC195A0A1B0GUA6 201 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 FAM47E-STBD1D6RA91 191 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 GPR25O00155 361 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 GIPC1O14908 333 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 SPTLC1O15269 473 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 AQP9O43315 295 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 UGT1A9O60656 530 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 NOL3O60936 208 aaKnown RBP14.14□□□□□ -0.15
LINC02048-201ENST00000440556 BCAS2O75934 225 aaPredicted RBP14.14□□□□□ -0.15
LINC02048-201ENST00000440556 SERPINE1P05121 402 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 KRT5P13647 590 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 UGT1A6P19224 532 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 UGT1A1P22309 533 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 UGT1A4P22310 534 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 PRKCHP24723 683 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 ADSLP30566 484 aaPredicted RBP14.14□□□□□ -0.15
LINC02048-201ENST00000440556 UGT1A3P35503 534 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 UGT1A5P35504 534 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 GSSP48637 474 aa14.14□□□□□ -0.15
LINC02048-201ENST00000440556 NDST2P52849 883 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms