RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 ZRANB3Q5FWF4 1079 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 SLC35C1Q96A29 364 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 APOL2Q9BQE5 337 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 LATS2Q9NRM7 1088 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 RAB6BQ9NRW1 208 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 TMED5Q9Y3A6 229 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 SMNDC1O75940 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCBE1-202ENST00000439986 VAV1P15498 845 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 BDNFP23560 247 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 PM20D2Q8IYS1 436 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 STX19Q8N4C7 294 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 IPMKQ8NFU5 416 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 MCRS1Q96EZ8 462 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 ABCG4Q9H172 646 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 TCHHQ07283 1943 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 NCF1BA6NI72 391 aaPredicted RBP11.92□□□□□ -0.5
CCBE1-202ENST00000439986 SRRM3A6NNA2 597 aaPredicted RBP11.92□□□□□ -0.5
CCBE1-202ENST00000439986 NCF1CA8MVU1 366 aaPredicted RBP11.92□□□□□ -0.5
CCBE1-202ENST00000439986 KCNH1O95259 989 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 NCF1P14598 390 aaPredicted RBP11.92□□□□□ -0.5
CCBE1-202ENST00000439986 PSMC6P62333 389 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 FXNQ16595 210 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 NECAB2Q7Z6G3 386 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 LRRC71Q8N4P6 559 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 BAP1Q92560 729 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 PTPRN2Q92932 1015 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 WNK4Q96J92 1243 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 GGA2Q9UJY4 613 aa11.92□□□□□ -0.5
CCBE1-202ENST00000439986 PRR23D1E9PI22 279 aaPredicted RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ZNF197O14709 1029 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 AIM2O14862 343 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 PRR23D2P0DMB1 279 aaPredicted RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 GDI1P31150 447 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 TEDDM1Q5T9Z0 273 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 CHMP1BQ7LBR1 199 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 BRSK2Q8IWQ3 736 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ZNF512Q96ME7 567 aaPredicted RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 PHB2Q99623 299 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 DCLRE1BQ9H816 532 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 KCNH4Q9UQ05 1017 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 NDUFS3O75489 264 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 MTA2O94776 668 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 HIST1H2AGP0C0S8 130 aaPredicted RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 GZMAP12544 262 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 HIST1H2ADP20671 130 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 HNRNPH3P31942 346 aaKnown RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ALDH5A1P51649 535 aaPredicted RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 LRRC55Q6ZSA7 311 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 IQCKQ8N0W5 287 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 FAM136AQ96C01 138 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 HIST1H2AHQ96KK5 128 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 HIST1H2AJQ99878 128 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 H2AFJQ9BTM1 129 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 RIOX1Q9H6W3 641 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 NAALADL1Q9UQQ1 740 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 KBTBD13C9JR72 458 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 CST8O60676 142 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 HSD17B4P51659 736 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ALDH6A1Q02252 535 aaKnown RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ZNF425Q6IV72 752 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 C11orf63Q6NUN7 778 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 CDC42EP5Q6NZY7 148 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 TXNRD3Q86VQ6 643 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ASAP3Q8TDY4 903 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 SH3TC2Q8TF17 1288 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 CENPOQ9BU64 300 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 TIPINQ9BVW5 301 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 TMEM106CQ9BVX2 250 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 WEE2P0C1S8 567 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ARHGEF7Q14155 803 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 TRADDQ15628 312 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 GOLGA7BQ2TAP0 167 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 TMEM119Q4V9L6 283 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ATP13A4Q4VNC1 1196 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 BORAQ6PGQ7 559 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 UBR7Q8N806 425 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ATXN2LQ8WWM7 1075 aaKnown RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 SYBUQ9NX95 663 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ATXN10Q9UBB4 475 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 CYP11B1P15538 503 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 STAT5BP51692 787 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ZNF157P51786 506 aaPredicted RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 TMEM132DQ14C87 1099 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 MTDHQ86UE4 582 aaKnown RBP11.91□□□□□ -0.5
CCBE1-202ENST00000439986 CHSY1Q86X52 802 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 MICALL2Q8IY33 904 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ARHGEF26Q96DR7 871 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 ZNF560Q96MR9 790 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 FAM111AQ96PZ2 611 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 GAL3ST1Q99999 423 aa11.91□□□□□ -0.5
CCBE1-202ENST00000439986 AFF2P51816 1311 aa11.9□□□□□ -0.5
CCBE1-202ENST00000439986 NUDT19A8MXV4 375 aa11.9□□□□□ -0.5
CCBE1-202ENST00000439986 PSMD11O00231 422 aa11.9□□□□□ -0.5
CCBE1-202ENST00000439986 HLA-DRAP01903 254 aa11.9□□□□□ -0.5
CCBE1-202ENST00000439986 EIF2B2P49770 351 aaKnown RBP11.9□□□□□ -0.5
CCBE1-202ENST00000439986 PRPF39Q86UA1 669 aaKnown RBP11.9□□□□□ -0.5
CCBE1-202ENST00000439986 VPS50Q96JG6 964 aa11.9□□□□□ -0.5
CCBE1-202ENST00000439986 OPLAHO14841 1288 aa11.9□□□□□ -0.5
CCBE1-202ENST00000439986 NME5P56597 212 aa11.9□□□□□ -0.5
CCBE1-202ENST00000439986 NFKB2Q00653 900 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms