RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 BEND5Q7L4P6 421 aa20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 RALGPS2Q86X27 583 aaPredicted RBP20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 XYLT1Q86Y38 959 aa20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 SUGP1Q8IWZ8 645 aaKnown RBP20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 DEFB106AQ8N104 65 aa20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 MSANTD4Q8NCY6 345 aa20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 ADAM32Q8TC27 787 aa20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 DQX1Q8TE96 717 aaKnown RBP20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 HAUS4Q9H6D7 363 aa20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 LTB4R2Q9NPC1 389 aa20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 ASNSD1Q9NWL6 643 aa20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 NDRG2Q9UN36 371 aaKnown RBP20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 HBS1LQ9Y450 684 aaKnown RBP20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.33■□□□□ 0.85
SEMA3B-206ENST00000439487 HSF2BPO75031 334 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 CYP17A1P05093 508 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 GLI1P08151 1106 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 GJA4P35212 333 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 ZBED6P86452 979 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 NR1H3Q13133 447 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 TRIP4Q15650 581 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 ASTLQ6HA08 431 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 RHBDF2Q6PJF5 856 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 Q6ZNB5 142 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 MMS22LQ6ZRQ5 1243 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 TOGARAM2Q6ZUX3 1019 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 PHLDB2Q86SQ0 1253 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 ZDHHC17Q8IUH5 632 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 VSTM4Q8IW00 320 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 ZNF397Q8NF99 534 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 PLD4Q96BZ4 506 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 OTUB2Q96DC9 234 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 IQCDQ96DY2 449 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 FAM122AQ96E09 287 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 CHFRQ96EP1 664 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 SLC2A13Q96QE2 648 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 SYT11Q9BT88 431 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 TRIM62Q9BVG3 475 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 DCLK3Q9C098 648 aa20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 LUC7L2Q9Y383 392 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-206ENST00000439487 FAM170BA6NMN3 283 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 GOLGA8SH3BPF8 625 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 AOC1P19801 751 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 MMP8P22894 467 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 TARSP26639 723 aaKnown RBP20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 CASP14P31944 242 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 PRKCIP41743 596 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 CLCN5P51795 746 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 RNASE9P60153 205 aaKnown RBP20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 PITX1P78337 314 aaPredicted RBP20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 CENPCQ03188 943 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 KLHL30Q0D2K2 578 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 PON2Q15165 354 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 DCAF6Q58WW2 860 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 LY6G5CQ5SRR4 150 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 SPECC1LQ69YQ0 1117 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 SARM1Q6SZW1 724 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 SLC26A9Q7LBE3 791 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 ZNF571Q7Z3V5 609 aaPredicted RBP20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 TAC4Q86UU9 113 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 DENND1CQ8IV53 801 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 TMEM105Q8N8V8 129 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 PJA1Q8NG27 643 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 OLIG1Q8TAK6 271 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 MSANTD3Q96H12 275 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 C11orf70Q9BRQ4 267 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 TRIM5Q9C035 493 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 AGO1Q9UL18 857 aaKnown RBP20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 SIT1Q9Y3P8 196 aa20.31■□□□□ 0.84
SEMA3B-206ENST00000439487 KIAA1549LQ6ZVL6 1849 aa20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 DAB1O75553 588 aa20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 DCNP07585 359 aaKnown RBP20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 AVPR2P30518 371 aa20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 NSFP46459 744 aaKnown RBP20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 TBX4P57082 545 aa20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 FAM102AQ5T9C2 384 aaPredicted RBP20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 NAIF1Q69YI7 327 aaPredicted RBP20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 TMEM25Q86YD3 366 aa20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 NUCKS1Q9H1E3 243 aaKnown RBP20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 SPHK2Q9NRA0 654 aa20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 ZNF510Q9Y2H8 683 aa20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 MRPS17Q9Y2R5 130 aaKnown RBP20.3■□□□□ 0.84
SEMA3B-206ENST00000439487 TRUB2O95900 331 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 HARS2P49590 506 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 CDK17Q00537 523 aa20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 PTP4A2Q12974 167 aa20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 GAB4Q2WGN9 574 aa20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 ACAD10Q6JQN1 1059 aa20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 PHF13Q86YI8 300 aaPredicted RBP20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 CCDC105Q8IYK2 499 aa20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 SYN2Q92777 582 aaPredicted RBP20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 SERPINB11Q96P15 392 aa20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 NELL2Q99435 816 aa20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 TAS2R14Q9NYV8 317 aa20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 ADAM22Q9P0K1 906 aa20.29■□□□□ 0.84
SEMA3B-206ENST00000439487 TMCO5BA8MYB1 307 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 ADH1CP00326 375 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 IGLV3-27P01718 113 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 ADH5P11766 374 aa20.28■□□□□ 0.84
SEMA3B-206ENST00000439487 SCNN1AP37088 669 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms