RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 BTKQ06187 659 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 CYLC2Q14093 348 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 INPP5AQ14642 412 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 LY6KQ17RY6 165 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 PTPN20Q4JDL3 420 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 BTBD8Q5XKL5 378 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 NOTUMQ6P988 496 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 DRICH1Q6PGQ1 229 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 ADGRD1Q6QNK2 874 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 NET1Q7Z628 596 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 IPMKQ8NFU5 416 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 GIPC2Q8TF65 315 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 GFM2Q969S9 779 aaKnown RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 IFT43Q96FT9 208 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 TSPAN17Q96FV3 270 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 CCT7Q99832 543 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 NTPCRQ9BSD7 190 aaKnown RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 FAM192AQ9GZU8 254 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 DENND2DQ9H6A0 471 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 PHRF1Q9P1Y6 1649 aaKnown RBP6.89□□□□□ -1.31
CSDE1-205ENST00000438362 MYPNQ86TC9 1320 aa6.89□□□□□ -1.31
CSDE1-205ENST00000438362 SLCO1B7G3V0H7 640 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 DCXO43602 365 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SH3BP5O60239 455 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 TRIM13O60858 407 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 CLPTM1O96005 669 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 PGK2P07205 417 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 MYL3P08590 195 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 FAM200BP0CF97 657 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 NCAM1P13591 858 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 UBA1P22314 1058 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 NOVP48745 357 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SLC6A3Q01959 620 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 BST2Q10589 180 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 CCDC153Q494R4 210 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 HABP4Q5JVS0 413 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 C4orf50Q6ZRC1 276 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 LINC00523Q86TU6 105 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 TDRD5Q8NAT2 981 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 KYQ8NBH2 561 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 OR6J1Q8NGC5 347 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 TRAPPC12Q8WVT3 735 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SLC44A1Q8WWI5 657 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.88□□□□□ -1.314e-6■■□□□ 14.1
CSDE1-205ENST00000438362 CNBD2Q96M20 576 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 APOL2Q9BQE5 337 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 PIH1D1Q9NWS0 290 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 NMRK1Q9NWW6 199 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 DDIT4Q9NX09 232 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 C2CD2Q9Y426 696 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 UMODL1Q5DID0 1318 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SPATA31C2B4DYI2 1134 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF862O60290 1169 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 LRCH4O75427 683 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SRP72O76094 671 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 VTNP04004 478 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 GFAPP14136 432 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 PGAM1P18669 254 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 EEF1DP29692 281 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 GLRBP48167 497 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 BLMHQ13867 455 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 TCHHL1Q5QJ38 904 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 LAYNQ6UX15 382 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 RIPOR1Q6ZS17 1223 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 ARCQ7LC44 396 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 ZDHHC17Q8IUH5 632 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 FBXO16Q8IX29 292 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 CALML6Q8TD86 181 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 GDPD5Q8WTR4 605 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 PYDC1Q8WXC3 89 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 CEP41Q9BYV8 373 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SP110Q9HB58 689 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SSU72Q9NP77 194 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 IARS2Q9NSE4 1012 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 WARS2Q9UGM6 360 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 AKAP11Q9UKA4 1901 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 A0A096LPK6 155 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SPDYE16A6NNV3 312 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 ABLIM1O14639 778 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 AVILO75366 819 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 CST3P01034 146 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 MYL4P12829 197 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 CDK7P50613 346 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SLC25A3Q00325 362 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 FAM83EQ2M2I3 478 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 TMEM259Q4ZIN3 620 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 ABHD15Q6UXT9 468 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 ALYREFQ86V81 257 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 MFN1Q8IWA4 741 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 LMO3Q8TAP4 145 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 PLEKHO2Q8TD55 490 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 DDI1Q8WTU0 396 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 ACO2Q99798 780 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 EBNA1BP2Q99848 306 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 MECRQ9BV79 373 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 NMUR2Q9GZQ4 415 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 SPATC1LQ9H0A9 340 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 MRPL46Q9H2W6 279 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 C12orf65Q9H3J6 166 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms