RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 ANKRD11Q6UB99 2663 aaPredicted RBP18.23■□□□□ 0.51
PTCH2-202ENST00000438067 PDXKO00764 312 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 STC2O76061 302 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 HLA-DRAP01903 254 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 KLKB1P03952 638 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 NR3C1P04150 777 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 SLFN14P0C7P3 912 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 GNSP15586 552 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 KIF11P52732 1056 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 RING1Q06587 406 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 INCA1Q0VD86 236 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 COL9A2Q14055 689 aaPredicted RBP18.23■□□□□ 0.51
PTCH2-202ENST00000438067 TRIP6Q15654 476 aaKnown RBP18.23■□□□□ 0.51
PTCH2-202ENST00000438067 WDR45BQ5MNZ6 344 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 LRSAM1Q6UWE0 723 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 SCD5Q86SK9 330 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 METTL3Q86U44 580 aaKnown RBP18.23■□□□□ 0.51
PTCH2-202ENST00000438067 CEP57L1Q8IYX8 460 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 BACH2Q9BYV9 841 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 SERTAD1Q9UHV2 236 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 NAGPAQ9UK23 515 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 SLC27A6Q9Y2P4 619 aa18.23■□□□□ 0.51
PTCH2-202ENST00000438067 NBEAQ8NFP9 2946 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 TAF4O00268 1085 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 CAPNS1P04632 268 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 TRIM21P19474 475 aaKnown RBP18.22■□□□□ 0.51
PTCH2-202ENST00000438067 CD6P30203 668 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 PIK3CAP42336 1068 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 FUT11Q495W5 492 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 KMT5BQ4FZB7 885 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 CEP135Q66GS9 1140 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 ZNF276Q8N554 614 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 DNASE2BQ8WZ79 361 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 TOE1Q96GM8 510 aaKnown RBP18.22■□□□□ 0.51
PTCH2-202ENST00000438067 PAGE5Q96GU1 130 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 NT5C1AQ9BXI3 368 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 CYP3A43Q9HB55 503 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 ITM2CQ9NQX7 267 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 EXOC1Q9NV70 894 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 WSB2Q9NYS7 404 aaPredicted RBP18.22■□□□□ 0.51
PTCH2-202ENST00000438067 PCDH15Q96QU1 1955 aa18.22■□□□□ 0.51
PTCH2-202ENST00000438067 ITPR1Q14643 2758 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 PENKP01210 267 aaPredicted RBP18.21■□□□□ 0.51
PTCH2-202ENST00000438067 PSEN1P49768 467 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 STARD3Q14849 445 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 FYB2Q5VWT5 728 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 CCDC186Q7Z3E2 898 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 TADA2BQ86TJ2 420 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 ZDHHC5Q9C0B5 715 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 MKRN2Q9H000 416 aaKnown RBP18.21■□□□□ 0.51
PTCH2-202ENST00000438067 PRDM16Q9HAZ2 1276 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 APOBEC3GQ9HC16 384 aaKnown RBP18.21■□□□□ 0.51
PTCH2-202ENST00000438067 USP36Q9P275 1121 aaKnown RBP18.21■□□□□ 0.51
PTCH2-202ENST00000438067 LHX6Q9UPM6 363 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 ZNF510Q9Y2H8 683 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 FRMD4BQ9Y2L6 1034 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 PCDHB9Q9Y5E1 797 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 USP3Q9Y6I4 520 aa18.21■□□□□ 0.51
PTCH2-202ENST00000438067 NPC1O15118 1278 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 ACTN4O43707 911 aaKnown RBP18.2■□□□□ 0.5
PTCH2-202ENST00000438067 RALAP11233 206 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 PDIA4P13667 645 aaKnown RBP18.2■□□□□ 0.5
PTCH2-202ENST00000438067 CHKAP35790 457 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 VAMP7P51809 220 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 ZNF132P52740 706 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 MFAP3P55082 362 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 COG7P83436 770 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 GRIK2Q13002 908 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 ENPP2Q13822 863 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 GEN1Q17RS7 908 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 NAXDQ8IW45 347 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 CADM4Q8NFZ8 388 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 ADAMTS14Q8WXS8 1223 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 GPR174Q9BXC1 333 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 DUSP16Q9BY84 665 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 CLIC5Q9NZA1 410 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 THAP10Q9P2Z0 257 aaPredicted RBP18.2■□□□□ 0.5
PTCH2-202ENST00000438067 NFE2L3Q9Y4A8 694 aa18.2■□□□□ 0.5
PTCH2-202ENST00000438067 ADAMTS9Q9P2N4 1935 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 A0A1B0GTW7 788 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 KCNJ18B7U540 433 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 CILPO75339 1184 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 KIF20AO95235 890 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
PTCH2-202ENST00000438067 ZSCAN22P10073 491 aaPredicted RBP18.19■□□□□ 0.5
PTCH2-202ENST00000438067 NCAM1P13591 858 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 CD58P19256 250 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 IL12RB1P42701 662 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 PROSER1Q86XN7 944 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 TMPRSS6Q8IU80 811 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 PNPLA1Q8N8W4 532 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 TAS1R2Q8TE23 839 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 CDK5RAP1Q96SZ6 601 aaKnown RBP18.19■□□□□ 0.5
PTCH2-202ENST00000438067 IMPG2Q9BZV3 1241 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 DCLK3Q9C098 648 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 RCOR1Q9UKL0 485 aa18.19■□□□□ 0.5
PTCH2-202ENST00000438067 MEI4A8MW99 385 aa18.18■□□□□ 0.5
PTCH2-202ENST00000438067 MAPK13O15264 365 aa18.18■□□□□ 0.5
PTCH2-202ENST00000438067 SYNCRIPO60506 623 aaKnown RBP18.18■□□□□ 0.5
PTCH2-202ENST00000438067 F13A1P00488 732 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms