RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 GTF2BQ00403 316 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 TFAP2DQ7Z6R9 452 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 TNIP2Q8NFZ5 429 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 NAF1Q96HR8 494 aaKnown RBP16.09■□□□□ 0.17
NEDD4-202ENST00000435532 LRRC1Q9BTT6 524 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 ULBP1Q9BZM6 244 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 EIF3LQ9Y262 564 aaKnown RBP16.09■□□□□ 0.17
NEDD4-202ENST00000435532 ANKRD63C9JTQ0 380 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
NEDD4-202ENST00000435532 CYP2A7P20853 494 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 MAPK9P45984 424 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 OTUD4Q01804 1114 aaKnown RBP16.09■□□□□ 0.17
NEDD4-202ENST00000435532 CNTN1Q12860 1018 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 CAPSQ13938 189 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 LRRC8EQ6NSJ5 796 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 RD3Q7Z3Z2 195 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 MCOLN2Q8IZK6 566 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 GPR20Q99678 358 aa16.09■□□□□ 0.17
NEDD4-202ENST00000435532 PDZK1P1A8MUH7 402 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 HACD1B0YJ81 288 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 NPR3P17342 541 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 IL10P22301 178 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 SERPINB4P48594 390 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 ARMC12Q5T9G4 340 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 FAM46CQ5VWP2 391 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 PSRC1Q6PGN9 363 aaPredicted RBP16.08■□□□□ 0.17
NEDD4-202ENST00000435532 KIAA1324Q6UXG2 1013 aaKnown RBP16.08■□□□□ 0.17
NEDD4-202ENST00000435532 TPGS1Q6ZTW0 290 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 LPPQ93052 612 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 ERP44Q9BS26 406 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 CDT1Q9H211 546 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 BTBD7Q9P203 1132 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 LTBP3Q9NS15 1303 aa16.08■□□□□ 0.17
NEDD4-202ENST00000435532 PSMD12O00232 456 aaPredicted RBP16.08■□□□□ 0.16
NEDD4-202ENST00000435532 OR56A5P0C7T3 313 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 C16orf59Q7L2K0 433 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 TOP6BLQ8N6T0 577 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 HJURPQ8NCD3 748 aaPredicted RBP16.08■□□□□ 0.16
NEDD4-202ENST00000435532 VPS51Q9UID3 782 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 FZD9O00144 591 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 TRIM16O95361 564 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 RFC1P35251 1148 aaPredicted RBP16.08■□□□□ 0.16
NEDD4-202ENST00000435532 SNRPD1P62314 119 aaKnown RBP16.08■□□□□ 0.16
NEDD4-202ENST00000435532 SKP1P63208 163 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 SGO1Q5FBB7 561 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 EMC1Q8N766 993 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 C9orf72Q96LT7 481 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 GOLGA8RI6L899 631 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 ZNF185O15231 689 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 ATAT1Q5SQI0 421 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 C6orf10Q5SRN2 563 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 CACHD1Q5VU97 1274 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 OR9Q1Q8NGQ5 310 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 TMEM159Q96B96 161 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 RIPOR3Q96MK2 946 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 PRKD2Q9BZL6 878 aa16.08■□□□□ 0.16
NEDD4-202ENST00000435532 RARGP13631 454 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 NOS2P35228 1153 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 TUSC3Q13454 348 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 PCYOX1LQ8NBM8 494 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 SMYD3Q9H7B4 428 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 PTPN7P35236 360 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 TRMT11Q7Z4G4 463 aaKnown RBP16.07■□□□□ 0.16
NEDD4-202ENST00000435532 NT5DC3Q86UY8 548 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 ABHD8Q96I13 439 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 PURBQ96QR8 312 aaKnown RBP16.07■□□□□ 0.16
NEDD4-202ENST00000435532 CHORDC1Q9UHD1 332 aaPredicted RBP16.07■□□□□ 0.16
NEDD4-202ENST00000435532 NFAT5O94916 1531 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 TRPC5OSA6NMA1 111 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 PRKCZQ05513 592 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 INPP5AQ14642 412 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 SETMARQ53H47 684 aaPredicted RBP16.07■□□□□ 0.16
NEDD4-202ENST00000435532 FAR2Q96K12 515 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 HSFY1Q96LI6 401 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 MLXIPLQ9NP71 852 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 ZNF7P17097 686 aaPredicted RBP16.07■□□□□ 0.16
NEDD4-202ENST00000435532 BEND6Q5SZJ8 279 aaPredicted RBP16.07■□□□□ 0.16
NEDD4-202ENST00000435532 MTSS1LQ765P7 747 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 MYLPFQ96A32 169 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 KIAA0895Q8NCT3 520 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 SGSM3Q96HU1 749 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 CDY1Q9Y6F8 540 aa16.07■□□□□ 0.16
NEDD4-202ENST00000435532 GJB1P08034 283 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 LRRC74AQ0VAA2 488 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 GRAMD1BQ3KR37 738 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 RBM23Q86U06 439 aaKnown RBP16.06■□□□□ 0.16
NEDD4-202ENST00000435532 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
NEDD4-202ENST00000435532 VAT1Q99536 393 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 TKTL2Q9H0I9 626 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 KCTD10Q9H3F6 313 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 C1orf146Q5VVC0 180 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 C11orf63Q6NUN7 778 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 RAD9BQ6WBX8 426 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 LRRC52Q8N7C0 313 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 COLGALT1Q8NBJ5 622 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 DCDC2Q9UHG0 476 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 GMNCA6NCL1 334 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 PDE2AO00408 941 aaPredicted RBP16.06■□□□□ 0.16
NEDD4-202ENST00000435532 LGR5O75473 907 aa16.06■□□□□ 0.16
NEDD4-202ENST00000435532 CNTFP26441 200 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms