RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 TBC1D3BA6NDS4 549 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 PRRT4C9JH25 899 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 RNF225M0QZC1 329 aaPredicted RBP16.51■□□□□ 0.23
NUP50-210ENST00000434760 FOXD2O60548 495 aaPredicted RBP16.51■□□□□ 0.23
NUP50-210ENST00000434760 CALCAP01258 141 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 ZNF806P0C7X5 589 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 VDRP11473 427 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 CORO1AP31146 461 aaKnown RBP16.51■□□□□ 0.23
NUP50-210ENST00000434760 P2RY2P41231 377 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 GCNT1Q02742 428 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 ELF2Q15723 593 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 LCLAT1Q6UWP7 414 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 SCML4Q8N228 414 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 ARHGAP18Q8N392 663 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 PPM1KQ8N3J5 372 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 TRIML1Q8N9V2 468 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 KCNV2Q8TDN2 545 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 KCTD13Q8WZ19 329 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 KREMEN1Q96MU8 473 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 MED15Q96RN5 788 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 SMOC1Q9H4F8 434 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 WDR35Q9P2L0 1181 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 FBXO10Q9UK96 956 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 INVSQ9Y283 1065 aa16.51■□□□□ 0.23
NUP50-210ENST00000434760 YJEFN3A6XGL0 299 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 E7ENQ6 273 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 CISD3P0C7P0 127 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 BRD2P25440 801 aaKnown RBP16.5■□□□□ 0.23
NUP50-210ENST00000434760 LIMK1P53667 647 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 SLC8A3P57103 927 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 UBE2HP62256 183 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 PREPLQ4J6C6 727 aaPredicted RBP16.5■□□□□ 0.23
NUP50-210ENST00000434760 TCEAL6Q6IPX3 200 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 RBBP8NLQ8NC74 664 aaPredicted RBP16.5■□□□□ 0.23
NUP50-210ENST00000434760 UBA3Q8TBC4 463 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 BHMTQ93088 406 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 TCEAL3Q969E4 200 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 XPO6Q96QU8 1125 aaKnown RBP16.5■□□□□ 0.23
NUP50-210ENST00000434760 ACOX2Q99424 681 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 HESX1Q9UBX0 185 aa16.5■□□□□ 0.23
NUP50-210ENST00000434760 AGO1Q9UL18 857 aaKnown RBP16.5■□□□□ 0.23
NUP50-210ENST00000434760 CHD8Q9HCK8 2581 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 TPRP12270 2363 aaKnown RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 TCRBV21S2A2A0A5A6 115 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 BCLAF3A2AJT9 711 aaKnown RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 GFRA2O00451 464 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 AFPP02771 609 aaKnown RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 HMBSP08397 361 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 HOXB2P14652 356 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 DGKGP49619 791 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 DAOAP59103 153 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 COG7P83436 770 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 KCNH2Q12809 1159 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 TRIP4Q15650 581 aaPredicted RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 CACNA1EQ15878 2313 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 MAP7D1Q3KQU3 841 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 USP39Q53GS9 565 aaKnown RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 RSRC2Q7L4I2 434 aaKnown RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 TRMT11Q7Z4G4 463 aaKnown RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 C11orf74Q86VG3 221 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 CPXM2Q8N436 756 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 SLC35F5Q8WV83 523 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 HMGB4Q8WW32 186 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 PLD4Q96BZ4 506 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 GABRG3Q99928 467 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 INTS2Q9H0H0 1204 aaKnown RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 POLMQ9NP87 494 aaPredicted RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 CNGB3Q9NQW8 809 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 PLK2Q9NYY3 685 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 KIAA1468Q9P260 1216 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 MBD1Q9UIS9 605 aaPredicted RBP16.49■□□□□ 0.23
NUP50-210ENST00000434760 KIAA1257Q9ULG3 409 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 CNTN6Q9UQ52 1028 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 SLC27A6Q9Y2P4 619 aa16.49■□□□□ 0.23
NUP50-210ENST00000434760 ACACBO00763 2458 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 FRYQ5TBA9 3013 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 SLC12A8A0AV02 714 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 DCDC2BA2VCK2 349 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 M0QYV0 167 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 ALDH1A2O94788 518 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 GNA14O95837 355 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 GABRG2P18507 467 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 NTSR1P30989 418 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 GBP1P32455 592 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 MFAP3P55082 362 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 AASDHQ4L235 1098 aaPredicted RBP16.48■□□□□ 0.23
NUP50-210ENST00000434760 KIAA1211LQ6NV74 962 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 PMF1Q6P1K2 205 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 MSANTD2Q6P1R3 559 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 RRAGAQ7L523 313 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 DENND1CQ8IV53 801 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 FRMD1Q8N878 549 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 RLN3Q8WXF3 142 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 DCLK3Q9C098 648 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 LRRC4Q9HBW1 653 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 VPS45Q9NRW7 570 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 OLA1Q9NTK5 396 aaKnown RBP16.48■□□□□ 0.23
NUP50-210ENST00000434760 STRIP2Q9ULQ0 834 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 ZNF510Q9Y2H8 683 aa16.48■□□□□ 0.23
NUP50-210ENST00000434760 PCDHB4Q9Y5E5 795 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms