RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 MAML3Q96JK9 1138 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 ZMAT2Q96NC0 199 aaKnown RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 KLF6Q99612 283 aaPredicted RBP10.8□□□□□ -0.68
CD44-210ENST00000434472 ADAM33Q9BZ11 813 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 SETD4Q9NVD3 440 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 HAO1Q9UJM8 370 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 PCDHA11Q9Y5I1 949 aa10.8□□□□□ -0.68
CD44-210ENST00000434472 CITO14578 2027 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 SF3B1O75533 1304 aaKnown RBP eCLIP10.79□□□□□ -0.688e-6■■■■■ 107
CD44-210ENST00000434472 SLC15A5A6NIM6 579 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 FAM159BA6NKW6 160 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 KPNA7A9QM74 516 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 E7ENQ6 273 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 H3BRJ5 948 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 I3L4J1 428 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 PPEF2O14830 753 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 HGSO14964 777 aaPredicted RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 XPO1O14980 1071 aaKnown RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 DAB1O75553 588 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 GABBR2O75899 941 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 RECQL4O94761 1208 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 HAUS5O94927 633 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 LMNAP02545 664 aaKnown RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 C1QAP02745 245 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 CYP2C9P11712 490 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 TARSP26639 723 aaKnown RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 ADORA2BP29275 332 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 SERPINB4P48594 390 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 NRLP54845 237 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 NAB1Q13506 487 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 TAF1BQ53T94 588 aaPredicted RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 C9orf131Q5VYM1 1079 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 TIFABQ6ZNK6 161 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 GPR142Q7Z601 462 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 PLEKHH3Q7Z736 793 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 PRPF39Q86UA1 669 aaKnown RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 APPL2Q8NEU8 664 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 CCDC110Q8TBZ0 833 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 TFB1MQ8WVM0 346 aaKnown RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 TTC17Q96AE7 1141 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 RSRC1Q96IZ7 334 aaKnown RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 SIGLEC10Q96LC7 697 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 CSPG4P5Q96PW8 444 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 FAM111AQ96PZ2 611 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 KCTD15Q96SI1 283 aaPredicted RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 TINF2Q9BSI4 451 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 EIF2AQ9BY44 585 aaKnown RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 FAM49AQ9H0Q0 323 aaPredicted RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 TLE6Q9H808 572 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 EIF2B3Q9NR50 452 aaKnown RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 TRIM33Q9UPN9 1127 aa10.79□□□□□ -0.68
CD44-210ENST00000434472 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.79□□□□□ -0.68
CD44-210ENST00000434472 CCL15-CCL14A0A0B4J2E2 113 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 MBLAC1A4D2B0 266 aaPredicted RBP10.78□□□□□ -0.68
CD44-210ENST00000434472 BTBD19C9JJ37 291 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 BIRC5O15392 142 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 HUS1O60921 280 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 AVILO75366 819 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 DGKIO75912 1065 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 SMIM10L2AP0DMW4 78 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 SMIM10L2BP0DMW5 78 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 T-ENOLP0DO92 83 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 FGFR1P11362 822 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 LCP1P13796 627 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 WARSP23381 471 aaKnown RBP10.78□□□□□ -0.68
CD44-210ENST00000434472 MATKP42679 507 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 KRT72Q14CN4 511 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 CCL15Q16663 113 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 SLC25A52Q3SY17 297 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 XKR4Q5GH76 650 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 STXBP5Q5T5C0 1151 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 FAXCQ5TGI0 409 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 FAM91A1Q658Y4 838 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 STEAP4Q687X5 459 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 KCNT2Q6UVM3 1135 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 UNC5AQ6ZN44 842 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 LIMS2Q7Z4I7 341 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 CLNKQ7Z7G1 428 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 MTDHQ86UE4 582 aaKnown RBP10.78□□□□□ -0.68
CD44-210ENST00000434472 LONP2Q86WA8 852 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 TOP6BLQ8N6T0 577 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 RFWD2Q8NHY2 731 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 KBTBD7Q8WVZ9 684 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 HTR3CQ8WXA8 447 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 C18orf25Q96B23 403 aaPredicted RBP10.78□□□□□ -0.68
CD44-210ENST00000434472 SLC7A6OSQ96CW6 309 aaPredicted RBP10.78□□□□□ -0.68
CD44-210ENST00000434472 NSL1Q96IY1 281 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 C7orf26Q96N11 449 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 SRPK1Q96SB4 655 aaKnown RBP10.78□□□□□ -0.68
CD44-210ENST00000434472 B3GNT5Q9BYG0 378 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 DPEP3Q9H4B8 488 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 FZD10Q9ULW2 581 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 PLLPQ9Y342 182 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 NME7Q9Y5B8 376 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 MAD1L1Q9Y6D9 718 aa10.78□□□□□ -0.68
CD44-210ENST00000434472 A0A0A0MRY4 1105 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 SMIM28A0A1B0GU29 152 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 CCDC22O60826 627 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 METTL18O95568 372 aa10.77□□□□□ -0.68
CD44-210ENST00000434472 ANP32DO95626 131 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms