RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 NPHP3Q7Z494 1330 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 TRPM2O94759 1503 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 DIP2AQ14689 1571 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 LRPPRCP42704 1394 aaKnown RBP8.03□□□□□ -1.12
PTPRK-212ENST00000434424 PI4KAP2A4QPH2 592 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 TAF5LO75529 589 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 POLD2P49005 469 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 ZNF844Q08AG5 666 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 TAPT1Q6NXT6 567 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 CCDC129Q6ZRS4 1044 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 CHD1LQ86WJ1 897 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 UNC5CLQ8IV45 518 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 TXNDC5Q8NBS9 432 aaKnown RBP8.03□□□□□ -1.12
PTPRK-212ENST00000434424 DNAJB14Q8TBM8 379 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 HMGB4Q8WW32 186 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 RNF125Q96EQ8 232 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 NUDT22Q9BRQ3 303 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 CCDC68Q9H2F9 335 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 FSCN3Q9NQT6 498 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 POGKQ9P215 609 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 KCND3Q9UK17 655 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 CNPY2Q9Y2B0 182 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 ADAMTS13Q76LX8 1427 aa8.03□□□□□ -1.12
PTPRK-212ENST00000434424 C9orf118A6NHY6 69 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 CD3EAPO15446 510 aaKnown RBP8.02□□□□□ -1.13
PTPRK-212ENST00000434424 PRSS23O95084 383 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 FCER1AP12319 257 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 KCNA3P22001 575 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 HOXD12P35452 270 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 KRT20P35900 424 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 ZEB1P37275 1124 aaPredicted RBP8.02□□□□□ -1.13
PTPRK-212ENST00000434424 GCLCP48506 637 aaPredicted RBP8.02□□□□□ -1.13
PTPRK-212ENST00000434424 CDK7P50613 346 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 ZNF134P52741 427 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 SLFN5Q08AF3 891 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 MYO1EQ12965 1108 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 CSHL1Q14406 222 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 BAK1Q16611 211 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 TAF2Q6P1X5 1199 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 GPRIN1Q7Z2K8 1008 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 ZDHHC12Q96GR4 267 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 ZNF512Q96ME7 567 aaPredicted RBP8.02□□□□□ -1.13
PTPRK-212ENST00000434424 CPPED1Q9BRF8 314 aaPredicted RBP8.02□□□□□ -1.13
PTPRK-212ENST00000434424 TRIM5Q9C035 493 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 USP22Q9UPT9 525 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 ABCC5O15440 1437 aa8.02□□□□□ -1.13
PTPRK-212ENST00000434424 CEP152O94986 1710 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 VWA3AA6NCI4 1184 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 DRGXA6NNA5 263 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 STX16-NPEPL1H3BU86 382 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 STX16O14662 325 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 SPTLC2O15270 562 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 PLOD3O60568 738 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 RPP40O75818 363 aaKnown RBP8.01□□□□□ -1.13
PTPRK-212ENST00000434424 HK1P19367 917 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 MGAT1P26572 445 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 PGM1P36871 562 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 KCNC1P48547 511 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 CCR9P51686 369 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 ARF3P61204 181 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-212ENST00000434424 ARF1P84077 181 aaKnown RBP8.01□□□□□ -1.13
PTPRK-212ENST00000434424 DLX2Q07687 328 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-212ENST00000434424 ERV3-1Q14264 604 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 GPR68Q15743 365 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 PTCHD3Q3KNS1 767 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 GALNTL6Q49A17 601 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 FAM111BQ6SJ93 734 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 B4GALNT4Q76KP1 1039 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 KRT27Q7Z3Y8 459 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 R3HCC1LQ7Z5L2 792 aaKnown RBP8.01□□□□□ -1.13
PTPRK-212ENST00000434424 ARMC8Q8IUR7 673 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 LSMEM1Q8N8F7 131 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 NSUN7Q8NE18 718 aaKnown RBP8.01□□□□□ -1.13
PTPRK-212ENST00000434424 PHACTR3Q96KR7 559 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 HIST1H2AAQ96QV6 131 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 C12orf65Q9H3J6 166 aaKnown RBP8.01□□□□□ -1.13
PTPRK-212ENST00000434424 NOL7Q9UMY1 257 aaKnown RBP8.01□□□□□ -1.13
PTPRK-212ENST00000434424 MRPS17Q9Y2R5 130 aaKnown RBP8.01□□□□□ -1.13
PTPRK-212ENST00000434424 ADGRL3Q9HAR2 1447 aa8.01□□□□□ -1.13
PTPRK-212ENST00000434424 CCDC195A0A1B0GUA6 201 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 DHHO43323 396 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 DOK2O60496 412 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 CSF1P09603 554 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 ALOX12P18054 663 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 GNAT2P19087 354 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 ABCD3P28288 659 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 PSMC2P35998 433 aaKnown RBP8□□□□□ -1.13
PTPRK-212ENST00000434424 STAT1P42224 750 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 GALNT2Q10471 571 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 CFAP58Q5T655 872 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 ANO7Q6IWH7 933 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 ZFPM1Q8IX07 1006 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 MBD3L2Q8NHZ7 208 aaPredicted RBP8□□□□□ -1.13
PTPRK-212ENST00000434424 POC1BQ8TC44 478 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 TBC1D22AQ8WUA7 517 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 MARS2Q96GW9 593 aaKnown RBP8□□□□□ -1.13
PTPRK-212ENST00000434424 LCORQ96JN0 433 aaPredicted RBP8□□□□□ -1.13
PTPRK-212ENST00000434424 PTDSS2Q9BVG9 487 aa8□□□□□ -1.13
PTPRK-212ENST00000434424 REXO4Q9GZR2 422 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms