RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 FAM155BO75949 473 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 USP17L7P0C7H9 530 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 PROZP22891 400 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 RANBP1P43487 201 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SEPT6Q14141 434 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 OASLQ15646 514 aaKnown RBP11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SOWAHAQ2M3V2 549 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 MSS51Q4VC12 460 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 RHBDF2Q6PJF5 856 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 ANKRD52Q8NB46 1076 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 MCRS1Q96EZ8 462 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 L3MBTL3Q96JM7 780 aaPredicted RBP11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SCYL1Q96KG9 808 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SYT15Q9BQS2 421 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 FRMD8P1Q9BZ68 369 aaPredicted RBP11.8□□□□□ -0.52
CLDN4-202ENST00000431918 MAGEB5Q9BZ81 275 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 ZFATQ9P243 1243 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SNRPAP09012 282 aaKnown RBP11.8□□□□□ -0.52
CLDN4-202ENST00000431918 TFE3P19532 575 aaPredicted RBP11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SLC8A1P32418 973 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 ITIH4Q14624 930 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 NOMO1Q15155 1222 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SREK1Q8WXA9 508 aaKnown RBP11.8□□□□□ -0.52
CLDN4-202ENST00000431918 TMEM109Q9BVC6 243 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 TSPYL2Q9H2G4 693 aaPredicted RBP11.8□□□□□ -0.52
CLDN4-202ENST00000431918 MANSC1Q9H8J5 431 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 ZFYVE28Q9HCC9 887 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 CDY2AQ9Y6F7 541 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 USH1CQ9Y6N9 552 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 DCTN3O75935 186 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 NDUFV1P49821 464 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 MPP2Q14168 576 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SLC1A5Q15758 541 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 OLFML2BQ68BL8 750 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 RFX8Q6ZV50 586 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 COLGALT1Q8NBJ5 622 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 GRAMD1AQ96CP6 724 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 STAMBPL1Q96FJ0 436 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 CELF6Q96J87 481 aaKnown RBP11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SNX27Q96L92 541 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 FAM210AQ96ND0 272 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 ADAM7Q9H2U9 754 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 ETNK2Q9NVF9 386 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 PTPN1P18031 435 aaKnown RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 BGNP21810 368 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 TYK2P29597 1187 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 GRIK1P39086 918 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 PREPLQ4J6C6 727 aaPredicted RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 ABI1Q8IZP0 508 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 PCDH19Q8TAB3 1148 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 KCNV2Q8TDN2 545 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 RAB3IPQ96QF0 476 aaPredicted RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 BFARQ9NZS9 450 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 HAO1Q9UJM8 370 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 COL1A2P08123 1366 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 TCRBV9S1A1TA0A576 114 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 ABLIM1O14639 778 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 FAM189A1O60320 539 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 ZWINTO95229 277 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 ANKRD23Q86SG2 305 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 UNC93AQ86WB7 457 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 CCDC185Q8N715 623 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 NIPA2Q8N8Q9 360 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 TGM2P21980 687 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 TSPY1Q01534 308 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 C6orf163Q5TEZ5 329 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 CAPRIN2Q6IMN6 1127 aaKnown RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 RASSF3Q86WH2 238 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 ARFGAP1Q8N6T3 406 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 LRRC52Q8N7C0 313 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 CMASQ8NFW8 434 aaPredicted RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 PPP4R1Q8TF05 950 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 ZNF669Q96BR6 464 aaPredicted RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 KDM4CQ9H3R0 1056 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 TMPRSS4Q9NRS4 437 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 ST3GAL5Q9UNP4 418 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 TRIM33Q9UPN9 1127 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 ABHD2P08910 425 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 ESRRAP11474 423 aaPredicted RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 PDK1Q15118 436 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 LDLRAD1Q5T700 205 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 HTR3CQ8WXA8 447 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 STMN2Q93045 179 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 TRIM56Q9BRZ2 755 aaKnown RBP11.79□□□□□ -0.52
CLDN4-202ENST00000431918 SLC38A7Q9NVC3 462 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 SLC17A7Q9P2U7 560 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 RPS6KL1Q9Y6S9 549 aa11.79□□□□□ -0.52
CLDN4-202ENST00000431918 WDR27A2RRH5 827 aa11.78□□□□□ -0.52
CLDN4-202ENST00000431918 HAUS5O94927 633 aa11.78□□□□□ -0.52
CLDN4-202ENST00000431918 CDH5P33151 784 aaPredicted RBP11.78□□□□□ -0.52
CLDN4-202ENST00000431918 GARSP41250 739 aaKnown RBP11.78□□□□□ -0.52
CLDN4-202ENST00000431918 ABCG1P45844 678 aa11.78□□□□□ -0.52
CLDN4-202ENST00000431918 CPA2P48052 419 aa11.78□□□□□ -0.52
CLDN4-202ENST00000431918 PRPSAP1Q14558 356 aa11.78□□□□□ -0.52
CLDN4-202ENST00000431918 FAM187BQ17R55 369 aa11.78□□□□□ -0.52
CLDN4-202ENST00000431918 TTC39BQ5VTQ0 682 aaPredicted RBP11.78□□□□□ -0.52
CLDN4-202ENST00000431918 BTBD8Q5XKL5 378 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms