RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SLC32A1Q9H598 525 aa15.65■□□□□ 0.1
MSH5-208ENST00000429846 FBXO10Q9UK96 956 aa15.65■□□□□ 0.1
MSH5-208ENST00000429846 NUDT5Q9UKK9 219 aa15.65■□□□□ 0.1
MSH5-208ENST00000429846 SLC27A6Q9Y2P4 619 aa15.65■□□□□ 0.1
MSH5-208ENST00000429846 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
MSH5-208ENST00000429846 PCDH15Q96QU1 1955 aa15.65■□□□□ 0.1
MSH5-208ENST00000429846 ATXN2Q99700 1313 aaKnown RBP15.65■□□□□ 0.1
MSH5-208ENST00000429846 IGHV1OR15-9A0A0B4J2B8 117 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 UPK3BL1B0FP48 263 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 UPK3BL2E5RIL1 263 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 MDM4O15151 490 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 ZNF202O95125 648 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 PENKP01210 267 aaPredicted RBP15.64■□□□□ 0.09
MSH5-208ENST00000429846 CFIP05156 583 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 SERPINF2P08697 491 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 CISD3P0C7P0 127 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 EPB41P11171 864 aaKnown RBP15.64■□□□□ 0.09
MSH5-208ENST00000429846 WASP42768 502 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 UAP1L1Q3KQV9 507 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 ZNF394Q53GI3 561 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 ARHGAP17Q68EM7 881 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 TOGARAM2Q6ZUX3 1019 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 TMEM176AQ96HP8 235 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 HEXIM2Q96MH2 286 aaKnown RBP15.64■□□□□ 0.09
MSH5-208ENST00000429846 ACOX2Q99424 681 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 CISHQ9NSE2 258 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 RAB20Q9NX57 234 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 SLC6A14Q9UN76 642 aa15.64■□□□□ 0.09
MSH5-208ENST00000429846 ADAMTS9Q9P2N4 1935 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 CETN3O15182 167 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 ATXN3P54252 364 aaPredicted RBP15.63■□□□□ 0.09
MSH5-208ENST00000429846 GFPT1Q06210 699 aaPredicted RBP15.63■□□□□ 0.09
MSH5-208ENST00000429846 STARD3Q14849 445 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 RAB41Q5JT25 222 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 KIAA1211LQ6NV74 962 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 RSRC2Q7L4I2 434 aaKnown RBP15.63■□□□□ 0.09
MSH5-208ENST00000429846 SLC4A11Q8NBS3 891 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 UCMAQ8WVF2 138 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 FOXJ1Q92949 421 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 MRGPRX1Q96LB2 322 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 GOLPH3LQ9H4A5 285 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 CAPN10Q9HC96 672 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 RMND1Q9NWS8 449 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 CACNA2D2Q9NY47 1150 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 PLK2Q9NYY3 685 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 SUSD2Q9UGT4 822 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 RASAL2Q9UJF2 1139 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 STRIP2Q9ULQ0 834 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 CYP8B1Q9UNU6 501 aa15.63■□□□□ 0.09
MSH5-208ENST00000429846 PCNX2A6NKB5 2137 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 CACNA1EQ15878 2313 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 CKAP5Q14008 2032 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 SLC16A3O15427 465 aaKnown RBP15.62■□□□□ 0.09
MSH5-208ENST00000429846 KLKB1P03952 638 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 CYBBP04839 570 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 PROS1P07225 676 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 CORO1AP31146 461 aaKnown RBP15.62■□□□□ 0.09
MSH5-208ENST00000429846 MAPK8P45983 427 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 RAD23BP54727 409 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 MFAP3P55082 362 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 EFEMP1Q12805 493 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 FOXC1Q12948 553 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 EIF4HQ15056 248 aaKnown RBP15.62■□□□□ 0.09
MSH5-208ENST00000429846 COBLL1Q53SF7 1204 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 FYB2Q5VWT5 728 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 METTL3Q86U44 580 aaKnown RBP15.62■□□□□ 0.09
MSH5-208ENST00000429846 PIGZQ86VD9 579 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 CPXM2Q8N436 756 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 HDDC3Q8N4P3 179 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 ANKRD52Q8NB46 1076 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 DEFB124Q8NES8 71 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 SEMA4DQ92854 862 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 BHMTQ93088 406 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 HSPA12BQ96MM6 686 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 OLA1Q9NTK5 396 aaKnown RBP15.62■□□□□ 0.09
MSH5-208ENST00000429846 MARCH2Q9P0N8 246 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 WASF3Q9UPY6 502 aa15.62■□□□□ 0.09
MSH5-208ENST00000429846 NDUFS2O75306 463 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 SYPP08247 313 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 BCAT1P54687 386 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 YWHAGP61981 247 aaKnown RBP eCLIP15.61■□□□□ 0.09
MSH5-208ENST00000429846 YWHAEP62258 255 aaKnown RBP15.61■□□□□ 0.09
MSH5-208ENST00000429846 SEMA3BQ13214 749 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 ENPP2Q13822 863 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 SYCP2LQ5T4T6 812 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 UNQ6494/PRO21346Q6UXR6 183 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 ANKS1BQ7Z6G8 1248 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 SLC41A1Q8IVJ1 513 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 FAM217AQ8IXS0 508 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 TRIML1Q8N9V2 468 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 PLD4Q96BZ4 506 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 ZNF419Q96HQ0 510 aaPredicted RBP15.61■□□□□ 0.09
MSH5-208ENST00000429846 ARID3AQ99856 593 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 ADAM33Q9BZ11 813 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 GTPBP4Q9BZE4 634 aaKnown RBP15.61■□□□□ 0.09
MSH5-208ENST00000429846 THAP10Q9P2Z0 257 aaPredicted RBP15.61■□□□□ 0.09
MSH5-208ENST00000429846 AGO1Q9UL18 857 aaKnown RBP15.61■□□□□ 0.09
MSH5-208ENST00000429846 COQ4Q9Y3A0 265 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 NFE2L3Q9Y4A8 694 aa15.61■□□□□ 0.09
MSH5-208ENST00000429846 RAD54BQ9Y620 910 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms