RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 GRPEL1Q9HAV7 217 aa23.29■■□□□ 1.32
PTPN18-205ENST00000428843 TMEM59LQ9UK28 342 aa23.29■■□□□ 1.32
PTPN18-205ENST00000428843 SSU72P8A0A1W2PR75 194 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 PI4K2BG5E9Z4 385 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 GJB6O95452 261 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 ARSAP15289 507 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 NOS2P35228 1153 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 MATKP42679 507 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 CDK17Q00537 523 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 TNK2Q07912 1038 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 PDGFRLQ15198 375 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 TRIP4Q15650 581 aaPredicted RBP23.28■■□□□ 1.32
PTPN18-205ENST00000428843 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.28■■□□□ 1.32
PTPN18-205ENST00000428843 SPC24Q8NBT2 197 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 DNASE1L2Q92874 299 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 PLD4Q96BZ4 506 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 ISCUQ9H1K1 167 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 EBF3Q9H4W6 596 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 TRPV5Q9NQA5 729 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 HPS4Q9NQG7 708 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.28■■□□□ 1.32
PTPN18-205ENST00000428843 LSM7Q9UK45 103 aaKnown RBP23.28■■□□□ 1.32
PTPN18-205ENST00000428843 A0A0C4DFX4 3053 aa23.28■■□□□ 1.32
PTPN18-205ENST00000428843 TCRBV5S1A1TA0A578 114 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 SLC9A3R1O14745 358 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-205ENST00000428843 TRUB2O95900 331 aaKnown RBP23.27■■□□□ 1.32
PTPN18-205ENST00000428843 IGLV3-25P01717 112 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 RRM1P23921 792 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 CORO1AP31146 461 aaKnown RBP23.27■■□□□ 1.32
PTPN18-205ENST00000428843 FLT3P36888 993 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 KPNA1P52294 538 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-205ENST00000428843 ASTE1Q2TB18 679 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-205ENST00000428843 EML3Q32P44 896 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 IER5LQ5T953 404 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 TRNP1Q6NT89 227 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 ARCQ7LC44 396 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 BBS7Q8IWZ6 715 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 C3orf20Q8ND61 904 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 SERPINB11Q96P15 392 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 SELENOOQ9BVL4 669 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 DEF6Q9H4E7 631 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 TBC1D14Q9P2M4 693 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 FBXL21Q9UKT6 434 aa23.27■■□□□ 1.32
PTPN18-205ENST00000428843 TTC28Q96AY4 2481 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 IRAK2O43187 625 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 IGLV3-27P01718 113 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 KLKB1P03952 638 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 TBX4P57082 545 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 SIGLEC14Q08ET2 396 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 NNTQ13423 1086 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 DNAJC24Q6P3W2 148 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 ALKBH5Q6P6C2 394 aaKnown RBP23.26■■□□□ 1.31
PTPN18-205ENST00000428843 Q6ZNB5 142 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 EMC1Q8N766 993 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 JOSD2Q8TAC2 188 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 TTC8Q8TAM2 541 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 CSGALNACT1Q8TDX6 532 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 ATP2A3Q93084 1043 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 DDX23Q9BUQ8 820 aaKnown RBP23.26■■□□□ 1.31
PTPN18-205ENST00000428843 DCLK3Q9C098 648 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 NHEJ1Q9H9Q4 299 aaPredicted RBP23.26■■□□□ 1.31
PTPN18-205ENST00000428843 GTSE1Q9NYZ3 720 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 IMPACTQ9P2X3 320 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 WNT16Q9UBV4 365 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 CA14Q9ULX7 337 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 NENFQ9UMX5 172 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 TLR6Q9Y2C9 796 aa23.26■■□□□ 1.31
PTPN18-205ENST00000428843 ATMINO43313 823 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-205ENST00000428843 KRT3P12035 628 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 GFPT1Q06210 699 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-205ENST00000428843 RUNX3Q13761 415 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 SLC18A3Q16572 532 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 SLC44A4Q53GD3 710 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 CCDC122Q5T0U0 273 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 FCRL2Q96LA5 508 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-205ENST00000428843 CCDC42Q96M95 316 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 PANX2Q96RD6 677 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 NPY6RQ99463 290 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 FAM204AQ9H8W3 233 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 HEBP1Q9NRV9 189 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 DDIT4Q9NX09 232 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 RRN3Q9NYV6 651 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 STAP1Q9ULZ2 295 aa23.25■■□□□ 1.31
PTPN18-205ENST00000428843 OTOL1A6NHN0 477 aaPredicted RBP23.24■■□□□ 1.31
PTPN18-205ENST00000428843 SIGLEC16A6NMB1 481 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 TFE3P19532 575 aaPredicted RBP23.24■■□□□ 1.31
PTPN18-205ENST00000428843 GBP1P32455 592 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 HARS2P49590 506 aaKnown RBP23.24■■□□□ 1.31
PTPN18-205ENST00000428843 SULT1E1P49888 294 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 RING1Q06587 406 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 EIF4EBP2Q13542 120 aaPredicted RBP23.24■■□□□ 1.31
PTPN18-205ENST00000428843 ITPRIPL2Q3MIP1 535 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 OTUD1Q5VV17 481 aaPredicted RBP23.24■■□□□ 1.31
PTPN18-205ENST00000428843 TRIM67Q6ZTA4 783 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 DENND1CQ8IV53 801 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 ADGRG2Q8IZP9 1017 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 RXFP2Q8WXD0 754 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 NT5C3BQ969T7 300 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 ZNF653Q96CK0 615 aa23.24■■□□□ 1.31
PTPN18-205ENST00000428843 OTUB2Q96DC9 234 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms