RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 SCD5Q86SK9 330 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 SIX6OS1Q8N1H7 587 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 RNF139Q8WU17 664 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 TATDN2Q93075 761 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 SLC35C1Q96A29 364 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 PLD4Q96BZ4 506 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 NT5C1BQ96P26 610 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 ARID3AQ99856 593 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 NUSAP1Q9BXS6 441 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 MARCH2Q9P0N8 246 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 EVLQ9UI08 416 aaPredicted RBP16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 INVSQ9Y283 1065 aa16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 MYO18AQ92614 2054 aaKnown RBP16.22■□□□□ 0.19
CTDSP1-202ENST00000428361 CNOT1A5YKK6 2376 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 THADAQ6YHU6 1953 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 MDM4O15151 490 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 PAEPP09466 180 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 CHRM1P11229 460 aaPredicted RBP16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 KCNA4P22459 653 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 CORO1AP31146 461 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 FMO5P49326 533 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 HARS2P49590 506 aaKnown RBP16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 LYSMD4Q5XG99 296 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 PM20D1Q6GTS8 502 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 SYT12Q8IV01 421 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 SFTPA1Q8IWL2 248 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 CPXM2Q8N436 756 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 WBP2Q969T9 261 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 TMEM9BQ9NQ34 198 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 NUDT5Q9UKK9 219 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 SLC27A6Q9Y2P4 619 aa16.21■□□□□ 0.19
CTDSP1-202ENST00000428361 NUP205Q92621 2012 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 FGFR1OPO95684 399 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 PENKP01210 267 aaPredicted RBP16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 HNRNPLP14866 589 aaKnown RBP eCLIP16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 BCKDHBP21953 392 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 PDE4CQ08493 712 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 EIF4HQ15056 248 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 MAP7D1Q3KQU3 841 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 EGFLAMQ63HQ2 1017 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 SCML4Q8N228 414 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 CEP76Q8TAP6 659 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 IPO4Q8TEX9 1081 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 KCTD13Q8WZ19 329 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 PIGKQ92643 395 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 GOLGA1Q92805 767 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 GABRG3Q99928 467 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 LSM14BQ9BX40 385 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 SLC2A11Q9BYW1 496 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 ULBP1Q9BZM6 244 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 CNGB3Q9NQW8 809 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 ABCC13Q9NSE7 274 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 FBXO10Q9UK96 956 aa16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 HBS1LQ9Y450 684 aaKnown RBP16.2■□□□□ 0.18
CTDSP1-202ENST00000428361 PLXND1Q9Y4D7 1925 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 ABCA7Q8IZY2 2146 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 SLC12A8A0AV02 714 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 LNP1A1A4G5 178 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 TRIM49BA6NDI0 452 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 TM4SF5O14894 197 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 LATS1O95835 1130 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 PMS1P54277 932 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 ANKS1BQ7Z6G8 1248 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 ZNF557Q8N988 423 aaPredicted RBP16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 RLN3Q8WXF3 142 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 IRX2Q9BZI1 471 aaPredicted RBP16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 SMOC1Q9H4F8 434 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 CALCOCO1Q9P1Z2 691 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 MAN1B1Q9UKM7 699 aa16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 TPRP12270 2363 aaKnown RBP16.19■□□□□ 0.18
CTDSP1-202ENST00000428361 O00370 1275 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 TIMM44O43615 452 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 HMBSP08397 361 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 GABRG2P18507 467 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 RPL6Q02878 288 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 ARID5AQ03989 594 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 ADIGQ0VDE8 80 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 MPPE1Q53F39 396 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 TRIM61Q5EBN2 209 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 FYB2Q5VWT5 728 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 TCEAL6Q6IPX3 200 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 KLHL10Q6JEL2 608 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 TMEM270Q6UE05 265 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 LCLAT1Q6UWP7 414 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 DENND1CQ8IV53 801 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 PPM1KQ8N3J5 372 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 DDI1Q8WTU0 396 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 IRGQQ8WZA9 623 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 BHMTQ93088 406 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 TCEAL3Q969E4 200 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 FAM81BQ96LP2 452 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 ZDHHC4Q9NPG8 344 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 RXFP3Q9NSD7 469 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 AGO1Q9UL18 857 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 PCDHB4Q9Y5E5 795 aa16.18■□□□□ 0.18
CTDSP1-202ENST00000428361 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.17■□□□□ 0.18
CTDSP1-202ENST00000428361 A0A1W2PQF6 199 aa16.17■□□□□ 0.18
CTDSP1-202ENST00000428361 ANTXRLA6NF34 631 aa16.17■□□□□ 0.18
CTDSP1-202ENST00000428361 C4orf47A7E2U8 309 aa16.17■□□□□ 0.18
CTDSP1-202ENST00000428361 PRRT4C9JH25 899 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms