RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZNF397Q8NF99 534 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 GOLGA1Q92805 767 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 ATOH1Q92858 354 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 IQCDQ96DY2 449 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 ZFYVE19Q96K21 471 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 XPO6Q96QU8 1125 aaKnown RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 PNKPQ96T60 521 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 ZSWIM1Q9BR11 485 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 ULBP1Q9BZM6 244 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 SMG9Q9H0W8 520 aaKnown RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 EPC1Q9H2F5 836 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 NMUR1Q9HB89 426 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 SPATA6Q9NWH7 488 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 OSER1Q9NX31 292 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 MARCH2Q9P0N8 246 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 CEP83Q9Y592 693 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 MYO16Q9Y6X6 1858 aa9.57□□□□□ -0.88
SMC1A-203ENST00000428014 ZFHX2Q9C0A1 2572 aaPredicted RBP9.57□□□□□ -0.88
SMC1A-203ENST00000428014 COL4A3Q01955 1670 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 SMTNL1A8MU46 457 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 M0QYV0 167 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 GPR37O15354 613 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 STC2O76061 302 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 ABL1P00519 1130 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 LTFP02788 710 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 ADH5P11766 374 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 ARSAP15289 507 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 GALK1P51570 392 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 ADIGQ0VDE8 80 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 LRMPQ12912 555 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 ORC1Q13415 861 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 EIF4EBP2Q13542 120 aaPredicted RBP9.56□□□□□ -0.88
SMC1A-203ENST00000428014 EIF4HQ15056 248 aaKnown RBP9.56□□□□□ -0.88
SMC1A-203ENST00000428014 EFHC1Q5JVL4 640 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 C10orf120Q5SQS8 335 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 BTBD8Q5XKL5 378 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 FSTL4Q6MZW2 842 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 RRAGAQ7L523 313 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 LONP2Q86WA8 852 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 RNF139Q8WU17 664 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 KAT5Q92993 513 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 NKD2Q969F2 451 aaPredicted RBP9.56□□□□□ -0.88
SMC1A-203ENST00000428014 LOXL4Q96JB6 756 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 SERPINB11Q96P15 392 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 DDX50Q9BQ39 737 aaKnown RBP9.56□□□□□ -0.88
SMC1A-203ENST00000428014 EDEM3Q9BZQ6 932 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 LINC00597Q9H2U6 94 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 RETREG1Q9H6L5 497 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 SAMSN1Q9NSI8 373 aaKnown RBP9.56□□□□□ -0.88
SMC1A-203ENST00000428014 WNT6Q9Y6F9 365 aa9.56□□□□□ -0.88
SMC1A-203ENST00000428014 GPR179Q6PRD1 2367 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 KIAA1549LQ6ZVL6 1849 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 YJEFN3A6XGL0 299 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 LGALS16A8MUM7 142 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 E7ENQ6 273 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 H0Y858 1186 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 K7ESF4 209 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 TIMM44O43615 452 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 LMNAP02545 664 aaKnown RBP9.55□□□□□ -0.88
SMC1A-203ENST00000428014 APODP05090 189 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 CCDC172P0C7W6 258 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 SLC2A3P11169 496 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 HNRNPLP14866 589 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMC1A-203ENST00000428014 CD72P21854 359 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 GABRB2P47870 512 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 HARS2P49590 506 aaKnown RBP9.55□□□□□ -0.88
SMC1A-203ENST00000428014 GSCP56915 257 aaPredicted RBP9.55□□□□□ -0.88
SMC1A-203ENST00000428014 TYRO3Q06418 890 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 KCNMA1Q12791 1236 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 GAS6Q14393 721 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 NCAPHQ15003 741 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 PON2Q15165 354 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 KRT31Q15323 416 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 SPDYCQ5MJ68 293 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 LY6G5CQ5SRR4 150 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 ADGRF1Q5T601 910 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 TRIM68Q6AZZ1 485 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 TRIM72Q6ZMU5 477 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 RSRC2Q7L4I2 434 aaKnown RBP9.55□□□□□ -0.88
SMC1A-203ENST00000428014 SLC26A9Q7LBE3 791 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 APTXQ7Z2E3 356 aaKnown RBP9.55□□□□□ -0.88
SMC1A-203ENST00000428014 WDR5BQ86VZ2 330 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 TERB1Q8NA31 727 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 MSANTD4Q8NCY6 345 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 USP33Q8TEY7 942 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 ATRIPQ8WXE1 791 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 SECISBP2LQ93073 1101 aaKnown RBP9.55□□□□□ -0.88
SMC1A-203ENST00000428014 ELMO3Q96BJ8 720 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 PGAP3Q96FM1 320 aaPredicted RBP9.55□□□□□ -0.88
SMC1A-203ENST00000428014 FUCA2Q9BTY2 467 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 POPDC2Q9HBU9 364 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 TMEM63CQ9P1W3 806 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 DEC1Q9P2X7 70 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 DNAJC12Q9UKB3 198 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 NDRG2Q9UN36 371 aaKnown RBP9.55□□□□□ -0.88
SMC1A-203ENST00000428014 TLR6Q9Y2C9 796 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 ZNF292O60281 2723 aa9.55□□□□□ -0.88
SMC1A-203ENST00000428014 CXorf51AA0A1B0GTR3 108 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 A0A1W2PQC6 194 aa9.54□□□□□ -0.88
SMC1A-203ENST00000428014 PRR23AA6NEV1 266 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms