RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 RASAL2Q9UJF2 1139 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 NUP210Q8TEM1 1887 aaPredicted RBP12.56□□□□□ -0.4
RFC4-206ENST00000427785 NYNRINQ9P2P1 1898 aaKnown RBP12.55□□□□□ -0.4
RFC4-206ENST00000427785 hCG_1818297A0A087WSY0 165 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 UQCRHLA0A096LP55 91 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 KRIT1O00522 736 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 CCL16O15467 120 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 CLASP2O75122 1294 aaKnown RBP12.55□□□□□ -0.4
RFC4-206ENST00000427785 ENDOD1O94919 500 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 ZRANB2O95218 330 aaKnown RBP eCLIP12.55□□□□□ -0.4
RFC4-206ENST00000427785 LRG1P02750 347 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 UQCRHP07919 91 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 EPCAMP16422 314 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 KDELR1P24390 212 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 CDKN2BP42772 138 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 ARSEP51690 589 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 CLCN4P51793 760 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 DYNLT1P63172 113 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 EFEMP1Q12805 493 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 NAA30Q147X3 362 aaPredicted RBP12.55□□□□□ -0.4
RFC4-206ENST00000427785 PPP6R3Q5H9R7 873 aaPredicted RBP12.55□□□□□ -0.4
RFC4-206ENST00000427785 C10orf120Q5SQS8 335 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 LILRA6Q6PI73 481 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 CCDC149Q6ZUS6 474 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 BEND5Q7L4P6 421 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 KLHL7Q8IXQ5 586 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 RCOR2Q8IZ40 523 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 PYROXD2Q8N2H3 581 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 KCTD6Q8NC69 237 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 SLC22A17Q8WUG5 538 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 PSMG2Q969U7 264 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 PGAP3Q96FM1 320 aaPredicted RBP12.55□□□□□ -0.4
RFC4-206ENST00000427785 CEP295NLQ96MC4 621 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 CALN1Q9BXU9 219 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 MAGEB5Q9BZ81 275 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 OSBPL8Q9BZF1 889 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 CCSER2Q9H7U1 834 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 PCDH18Q9HCL0 1135 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 ANLNQ9NQW6 1124 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 MAN1C1Q9NR34 630 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.55□□□□□ -0.4
RFC4-206ENST00000427785 TTC7AQ9ULT0 858 aaPredicted RBP12.55□□□□□ -0.4
RFC4-206ENST00000427785 FZD10Q9ULW2 581 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 MAFFQ9ULX9 164 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 NR2E1Q9Y466 385 aa12.55□□□□□ -0.4
RFC4-206ENST00000427785 I6L893 689 aaPredicted RBP12.54□□□□□ -0.4
RFC4-206ENST00000427785 TLR5O60602 858 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 TBX18O95935 607 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 ZDHHC11BP0C7U3 371 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 PTPN7P35236 360 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 GGCXP38435 758 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 CETN2P41208 172 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 PSEN1P49768 467 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 MRPS25P82663 173 aaKnown RBP12.54□□□□□ -0.4
RFC4-206ENST00000427785 ADCY2Q08462 1091 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 DPYSL3Q14195 570 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 SIX1Q15475 284 aaPredicted RBP12.54□□□□□ -0.4
RFC4-206ENST00000427785 ELF2Q15723 593 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 PPP2R5EQ16537 467 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 TFDP3Q5H9I0 405 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 EFHC2Q5JST6 749 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 PPM1LQ5SGD2 360 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 ERMARDQ5T6L9 678 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 SND1Q7KZF4 910 aaKnown RBP eCLIP12.54□□□□□ -0.4
RFC4-206ENST00000427785 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
RFC4-206ENST00000427785 RFX6Q8HWS3 928 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 ZDHHC14Q8IZN3 488 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 HS6ST3Q8IZP7 471 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 PDZD8Q8NEN9 1154 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 ATG4AQ8WYN0 398 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 TSC1Q92574 1164 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 RNF34Q969K3 372 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 HAUS1Q96CS2 278 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 TRMT2BQ96GJ1 504 aaKnown RBP12.54□□□□□ -0.4
RFC4-206ENST00000427785 SERPINB11Q96P15 392 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 NAP1L3Q99457 506 aaPredicted RBP12.54□□□□□ -0.4
RFC4-206ENST00000427785 FAM118BQ9BPY3 351 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 DDX47Q9H0S4 455 aaKnown RBP12.54□□□□□ -0.4
RFC4-206ENST00000427785 SLC28A3Q9HAS3 691 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 CLIC5Q9NZA1 410 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 R3HDM2Q9Y2K5 976 aaKnown RBP12.54□□□□□ -0.4
RFC4-206ENST00000427785 SNX10Q9Y5X0 201 aa12.54□□□□□ -0.4
RFC4-206ENST00000427785 GOLGA6L10A0A0M3HER8 536 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 EFCAB8A8MWE9 144 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 RFXAPO00287 272 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 PER2O15055 1255 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 RFPL2O75678 378 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 MOCS2O96007 188 aaPredicted RBP12.53□□□□□ -0.4
RFC4-206ENST00000427785 HMBSP08397 361 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 GBP1P32455 592 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 BMP8BP34820 402 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 CXCR3P49682 368 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 COPS2P61201 443 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 CYP4F8P98187 520 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 ITIH3Q06033 890 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 KLF1Q13351 362 aaPredicted RBP12.53□□□□□ -0.4
RFC4-206ENST00000427785 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
RFC4-206ENST00000427785 KCTD19Q17RG1 926 aaPredicted RBP12.53□□□□□ -0.4
RFC4-206ENST00000427785 BOLA3Q53S33 107 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms