RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 HAUS4Q9H6D7 363 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 SFMBT1Q9UHJ3 866 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 TMEM59LQ9UK28 342 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 LUC7L2Q9Y383 392 aaKnown RBP19.28■□□□□ 0.68
HDAC6-205ENST00000423941 SH3BP1Q9Y3L3 701 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 PIAS3Q9Y6X2 628 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 KANSL1LA0AUZ9 987 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 SLC12A8A0AV02 714 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 SPECC1L-ADORA2AF8WAN1 911 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 MAN2B1O00754 1011 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 HSF2BPO75031 334 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 CASP14P31944 242 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 KPNA1P52294 538 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-205ENST00000423941 TBX2Q13207 712 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-205ENST00000423941 TRIM14Q14142 442 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 TPRG1Q6ZUI0 275 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 TOGARAM2Q6ZUX3 1019 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 FAM217AQ8IXS0 508 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 CPA6Q8N4T0 437 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 NT5C3BQ969T7 300 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 SLC39A13Q96H72 371 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 NELL2Q99435 816 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 TBC1D17Q9HA65 648 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 STOML2Q9UJZ1 356 aa19.27■□□□□ 0.68
HDAC6-205ENST00000423941 BZW2Q9Y6E2 419 aaKnown RBP19.27■□□□□ 0.68
HDAC6-205ENST00000423941 KMT2EQ8IZD2 1858 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 MIA3Q5JRA6 1907 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 TCRBV5S1A1TA0A578 114 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 GFRA2O00451 464 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 NFATC1O95644 943 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 CYP17A1P05093 508 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 GZMAP12544 262 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 GJA4P35212 333 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 KLHL30Q0D2K2 578 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 DHCR24Q15392 516 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 C2CD6Q53TS8 623 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 ACAD10Q6JQN1 1059 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 TXNDC11Q6PKC3 985 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 ZNF852Q6ZMS4 543 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 MON1BQ7L1V2 547 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 DRC7Q8IY82 874 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 DEFB106AQ8N104 65 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 MSANTD4Q8NCY6 345 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 CPLX3Q8WVH0 158 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 AZIN2Q96A70 460 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 VCPIP1Q96JH7 1222 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 SYNCQ9H7C4 482 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 LSM7Q9UK45 103 aaKnown RBP19.26■□□□□ 0.67
HDAC6-205ENST00000423941 AGO1Q9UL18 857 aaKnown RBP19.26■□□□□ 0.67
HDAC6-205ENST00000423941 TLR6Q9Y2C9 796 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 ZNF510Q9Y2H8 683 aa19.26■□□□□ 0.67
HDAC6-205ENST00000423941 DDX3XO00571 662 aaKnown RBP eCLIP19.25■□□□□ 0.67
HDAC6-205ENST00000423941 TRDMT1O14717 391 aaKnown RBP19.25■□□□□ 0.67
HDAC6-205ENST00000423941 SCAMP3O14828 347 aaKnown RBP19.25■□□□□ 0.67
HDAC6-205ENST00000423941 LATS1O95835 1130 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 IRF1P10914 325 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 SKILP12757 684 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 AOC1P19801 751 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 TNFAIP3P21580 790 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 NOS2P35228 1153 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 SOX9P48436 509 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 PITX1P78337 314 aaPredicted RBP19.25■□□□□ 0.67
HDAC6-205ENST00000423941 C1QBPQ07021 282 aaKnown RBP19.25■□□□□ 0.67
HDAC6-205ENST00000423941 NR1H3Q13133 447 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 ASTLQ6HA08 431 aaPredicted RBP19.25■□□□□ 0.67
HDAC6-205ENST00000423941 MMS22LQ6ZRQ5 1243 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 CPXM2Q8N436 756 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 PJA1Q8NG27 643 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 FAM3CQ92520 227 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 CLDN23Q96B33 292 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 SERPINB11Q96P15 392 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 NPY6RQ99463 290 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 DNAJC7Q99615 494 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 TRIM5Q9C035 493 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 LTB4R2Q9NPC1 389 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 SPHK2Q9NRA0 654 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 DLGAP2Q9P1A6 1054 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 WDR35Q9P2L0 1181 aa19.25■□□□□ 0.67
HDAC6-205ENST00000423941 MTF2Q9Y483 593 aaPredicted RBP19.25■□□□□ 0.67
HDAC6-205ENST00000423941 IRAK2O43187 625 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 MSI1O43347 362 aaKnown RBP19.24■□□□□ 0.67
HDAC6-205ENST00000423941 PI15O43692 258 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 DAB1O75553 588 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 TRUB2O95900 331 aaKnown RBP19.24■□□□□ 0.67
HDAC6-205ENST00000423941 SERPING1P05155 500 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 CD72P21854 359 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 CORO1AP31146 461 aaKnown RBP19.24■□□□□ 0.67
HDAC6-205ENST00000423941 MATKP42679 507 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 NSFP46459 744 aaKnown RBP19.24■□□□□ 0.67
HDAC6-205ENST00000423941 DCAF6Q58WW2 860 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 TRNP1Q6NT89 227 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 PPP1R2P3Q6NXS1 205 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 WDR59Q6PJI9 974 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 BNIPLQ7Z465 357 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 TAC4Q86UU9 113 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 TTC16Q8NEE8 873 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 TTC8Q8TAM2 541 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 PGAP3Q96FM1 320 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-205ENST00000423941 MRFAP1L1Q96HT8 127 aa19.24■□□□□ 0.67
HDAC6-205ENST00000423941 FCRL2Q96LA5 508 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms