RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ARL8BQ9NVJ2 186 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 DNAJC25-GNG10A0A024R161 153 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 A0A1B0GUA9 196 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 TYROBPO43914 113 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 HUS1O60921 280 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 GHRP10912 638 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 DESP17661 470 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 MGAT1P26572 445 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 PEX6Q13608 980 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 EFHC2Q5JST6 749 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 FBXO47Q5MNV8 452 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 LCLAT1Q6UWP7 414 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 OLFML1Q6UWY5 402 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 POU5F2Q8N7G0 328 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 DENND1AQ8TEH3 1009 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 CLPTM1LQ96KA5 538 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 USP29Q9HBJ7 922 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 GGA2Q9UJY4 613 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 PPP2R3BQ9Y5P8 575 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 SRRM3A6NNA2 597 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-213ENST00000421756 MEI4A8MW99 385 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 KPNA7A9QM74 516 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 MAGEB2O15479 319 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 MGRN1O60291 552 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 ARL4AP40617 200 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 DGKDQ16760 1214 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 ISLR2Q6UXK2 745 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 UNC5AQ6ZN44 842 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 CYP4V2Q6ZWL3 525 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-213ENST00000421756 NUDCD3Q8IVD9 361 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 BRI3BPQ8WY22 251 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 NUDCD1Q96RS6 583 aa13.82□□□□□ -0.2
MCF2L-213ENST00000421756 KCTD15Q96SI1 283 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-213ENST00000421756 LOC100653049A0A140TA62 436 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 SMIM28A0A1B0GU29 152 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 GAS2O43903 313 aaKnown RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 KRT34O76011 436 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 UNC5CO95185 931 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 C6orf222P0C671 652 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 ATXN3P54252 364 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 PPIL2Q13356 520 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 CMC1Q7Z7K0 106 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 TNS4Q8IZW8 715 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 APPL2Q8NEU8 664 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 UTP4Q969X6 686 aaKnown RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 ATXN3LQ9H3M9 355 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 GBA2Q9HCG7 927 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 CPSF2Q9P2I0 782 aaKnown RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 TXNDC16Q9P2K2 825 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 RLFQ13129 1914 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 MMP3P08254 477 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 SMIM10L2AP0DMW4 78 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 SMIM10L2BP0DMW5 78 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 CDH5P33151 784 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 SERPINB4P48594 390 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 RWDD4Q6NW29 188 aaKnown RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 PAXIP1Q6ZW49 1069 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 CAND1Q86VP6 1230 aaKnown RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 SIX6OS1Q8N1H7 587 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 ARRDC4Q8NCT1 418 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 PAAF1Q9BRP4 392 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 CCDC134Q9H6E4 229 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 EURLQ9NYK6 297 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 KLHL8Q9P2G9 620 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 PSAT1Q9Y617 370 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 MOCS2O96007 188 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 OAS1P00973 400 aaKnown RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 USP17L7P0C7H9 530 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 PSMB4P28070 264 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 STIP1P31948 543 aaKnown RBP13.81□□□□□ -0.2
MCF2L-213ENST00000421756 LRRC36Q1X8D7 754 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 SPATA6LQ8N4H0 392 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 MICAL1Q8TDZ2 1067 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 GAD1Q99259 594 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 CYP4F11Q9HBI6 524 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 ITGA11Q9UKX5 1188 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 FIS1Q9Y3D6 152 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 TTC3P53804 2025 aa13.81□□□□□ -0.2
MCF2L-213ENST00000421756 H3BRJ5 948 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 MFSD11O43934 449 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 ZMPSTE24O75844 475 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 HAUS5O94927 633 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 BOLA3Q53S33 107 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 C9orf57Q5W0N0 161 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 ADGRD1Q6QNK2 874 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 ZNF354CQ86Y25 554 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 COLGALT1Q8NBJ5 622 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 CCDC124Q96CT7 223 aaKnown RBP13.8□□□□□ -0.2
MCF2L-213ENST00000421756 TINF2Q9BSI4 451 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 GYG2O15488 501 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 ABHD2P08910 425 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 ESRRAP11474 423 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-213ENST00000421756 NCAM1P13591 858 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 BST1Q10588 318 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 MOGSQ13724 837 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 SLC27A1Q6PCB7 646 aa13.8□□□□□ -0.2
MCF2L-213ENST00000421756 ADGRF2Q8IZF7 708 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms