RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 DNMT3LQ9UJW3 386 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 STAP1Q9ULZ2 295 aa16.39■□□□□ 0.21
DDX55-203ENST00000421670 A0A0A6YYK5 440 aaPredicted RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 MACROD2A1Z1Q3 448 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 M0QYT0 321 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 PRAMEF12O95522 483 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 TRUB2O95900 331 aaKnown RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 PSMA2P25787 234 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 GBP2P32456 591 aaPredicted RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 AVPR1AP37288 418 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 NOP2P46087 812 aaKnown RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 ZNF143P52747 638 aaPredicted RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 ATXN1P54253 815 aaKnown RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 ZXDBP98169 803 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 NME3Q13232 169 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 LEXMQ3ZCV2 418 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 KLHDC10Q6PID8 442 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 ZNF276Q8N554 614 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 TTC16Q8NEE8 873 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 ST13P5Q8NFI4 369 aaPredicted RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 ZSCAN18Q8TBC5 510 aaPredicted RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 NT5C3BQ969T7 300 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 TRIM44Q96DX7 344 aaPredicted RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 ZFRQ96KR1 1074 aaKnown RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 DDIT4Q9NX09 232 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 CDH7Q9ULB5 785 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 CCL26Q9Y258 94 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 CPQQ9Y646 472 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 TMEM110-MUSTN1A8MSY1 372 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 BTNL10A8MVZ5 291 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 DPYSL4O14531 572 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 IRAK2O43187 625 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 MTA2O94776 668 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 IGLV3-25P01717 112 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 HMBSP08397 361 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 ARHGAP25P42331 645 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 PTPN9P43378 593 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 TCEAL1Q15170 157 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 PTCRAQ6ISU1 281 aaPredicted RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 CPNE8Q86YQ8 564 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 FNIP1Q8TF40 1166 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 FAM172AQ8WUF8 416 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 SERPINB11Q96P15 392 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 CNPY3Q9BT09 278 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 GKN1Q9NS71 199 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 PIGVQ9NUD9 493 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 TRMT1Q9NXH9 659 aaKnown RBP16.38■□□□□ 0.21
DDX55-203ENST00000421670 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.38■□□□□ 0.21
DDX55-203ENST00000421670 GUCA1BQ9UMX6 200 aa16.38■□□□□ 0.21
DDX55-203ENST00000421670 TRIOO75962 3097 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 SLC12A8A0AV02 714 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 USP27XA6NNY8 438 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 MYO1FO00160 1098 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 KRT86O43790 486 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 IRF1P10914 325 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 NAP1L1P55209 391 aaKnown RBP16.37■□□□□ 0.21
DDX55-203ENST00000421670 MESDQ14696 234 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 ARHGAP29Q52LW3 1261 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 FAM78AQ5JUQ0 283 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 ARID3BQ8IVW6 561 aaPredicted RBP16.37■□□□□ 0.21
DDX55-203ENST00000421670 TSGA10Q9BZW7 698 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 GOLPH3Q9H4A6 298 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 RRN3Q9NYV6 651 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 GDE1Q9NZC3 331 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 PAXBP1Q9Y5B6 917 aa16.37■□□□□ 0.21
DDX55-203ENST00000421670 SCAMP3O14828 347 aaKnown RBP16.36■□□□□ 0.21
DDX55-203ENST00000421670 MOCS3O95396 460 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 PFKLP17858 780 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 HADHBP55084 474 aaKnown RBP16.36■□□□□ 0.21
DDX55-203ENST00000421670 HDAC4P56524 1084 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 SLC7A9P82251 487 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 DEUP1Q05D60 604 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 SMAD2Q15796 467 aaKnown RBP16.36■□□□□ 0.21
DDX55-203ENST00000421670 BNIPLQ7Z465 357 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 C17orf53Q8N3J3 647 aaPredicted RBP16.36■□□□□ 0.21
DDX55-203ENST00000421670 RIN3Q8TB24 985 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 USP13Q92995 863 aaPredicted RBP16.36■□□□□ 0.21
DDX55-203ENST00000421670 WBP2Q969T9 261 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 ASB16Q96NS5 453 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 TDP1Q9NUW8 608 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 IP6K2Q9UHH9 426 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 ZMYM5Q9UJ78 669 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 USTQ9Y2C2 406 aa16.36■□□□□ 0.21
DDX55-203ENST00000421670 SOBPA7XYQ1 873 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 ZSCAN12O43309 604 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 BUB1BO60566 1050 aaPredicted RBP16.35■□□□□ 0.21
DDX55-203ENST00000421670 IL9P15248 144 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 RDXP35241 583 aaKnown RBP16.35■□□□□ 0.21
DDX55-203ENST00000421670 KCNQ1P51787 676 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 TBX4P57082 545 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 EIF4EBP2Q13542 120 aaPredicted RBP16.35■□□□□ 0.21
DDX55-203ENST00000421670 TRIP4Q15650 581 aaPredicted RBP16.35■□□□□ 0.21
DDX55-203ENST00000421670 FAM131BQ86XD5 332 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 REXO1L1PQ8IX06 675 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 TPCN2Q8NHX9 752 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 ADAMTS19Q8TE59 1207 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 CENPIQ92674 756 aaPredicted RBP16.35■□□□□ 0.21
DDX55-203ENST00000421670 SMARCD2Q92925 531 aa16.35■□□□□ 0.21
DDX55-203ENST00000421670 PGAP3Q96FM1 320 aaPredicted RBP16.35■□□□□ 0.21
DDX55-203ENST00000421670 KLF16Q9BXK1 252 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms