RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 PRCPP42785 496 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 PTGER3P43115 390 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 SLC8A3P57103 927 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 IRX4P78413 519 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 FKBP3Q00688 224 aaKnown RBP18.23■□□□□ 0.51
MSH6-203ENST00000420813 TRIM61Q5EBN2 209 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 LYSMD4Q5XG99 296 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 PSAPL1Q6NUJ1 521 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 TOGARAM2Q6ZUX3 1019 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 PIGZQ86VD9 579 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 ANKRD52Q8NB46 1076 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 IPO4Q8TEX9 1081 aaKnown RBP18.23■□□□□ 0.51
MSH6-203ENST00000420813 TSG101Q99816 390 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 ARID3AQ99856 593 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 NUSAP1Q9BXS6 441 aaKnown RBP18.23■□□□□ 0.51
MSH6-203ENST00000420813 GTPBP4Q9BZE4 634 aaKnown RBP18.23■□□□□ 0.51
MSH6-203ENST00000420813 CALCOCO1Q9P1Z2 691 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 RASAL2Q9UJF2 1139 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 SLC27A6Q9Y2P4 619 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 CACNA1EQ15878 2313 aa18.23■□□□□ 0.51
MSH6-203ENST00000420813 ZNF217O75362 1048 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 PENKP01210 267 aaPredicted RBP18.22■□□□□ 0.51
MSH6-203ENST00000420813 KLKB1P03952 638 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 WASP42768 502 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 NOVA1P51513 510 aaKnown RBP18.22■□□□□ 0.51
MSH6-203ENST00000420813 CBWD6Q4V339 395 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 DCAF17Q5H9S7 520 aaPredicted RBP18.22■□□□□ 0.51
MSH6-203ENST00000420813 CBWD3Q5JTY5 395 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 CBWD5Q5RIA9 395 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 TCERG1LQ5VWI1 586 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 ARMCX6Q7L4S7 300 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 SPATA20Q8TB22 786 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 TATDN2Q93075 761 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 ACOX2Q99424 681 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 PILRBQ9UKJ0 227 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 STRIP2Q9ULQ0 834 aa18.22■□□□□ 0.51
MSH6-203ENST00000420813 PCDH15Q96QU1 1955 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 NPC1O15118 1278 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 NDUFV2P19404 249 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 CSRP1P21291 193 aaKnown RBP18.21■□□□□ 0.51
MSH6-203ENST00000420813 CORO1AP31146 461 aaKnown RBP18.21■□□□□ 0.51
MSH6-203ENST00000420813 YWHAGP61981 247 aaKnown RBP eCLIP18.21■□□□□ 0.51
MSH6-203ENST00000420813 YWHAEP62258 255 aaKnown RBP18.21■□□□□ 0.51
MSH6-203ENST00000420813 RPL6Q02878 288 aaKnown RBP18.21■□□□□ 0.51
MSH6-203ENST00000420813 LRRC63Q05C16 580 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 EFEMP1Q12805 493 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 PM20D1Q6GTS8 502 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 SLC23A3Q6PIS1 610 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 TMEM74BQ9NUR3 256 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 PLK2Q9NYY3 685 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 MARCH2Q9P0N8 246 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 CEP295Q9C0D2 2601 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 USP24Q9UPU5 2620 aa18.21■□□□□ 0.51
MSH6-203ENST00000420813 IGHV1OR15-9A0A0B4J2B8 117 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 GOLGA6L4A6NEF3 574 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 XPO1O14980 1071 aaKnown RBP18.2■□□□□ 0.5
MSH6-203ENST00000420813 SMC2O95347 1197 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 CEACAM1P13688 526 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 TKTL1P51854 596 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 ZNF132P52740 706 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 BCAT1P54687 386 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 CUL2Q13617 745 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 E2F5Q15329 346 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 FYB2Q5VWT5 728 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 ANKRD40Q6AI12 368 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 KIAA1211LQ6NV74 962 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 RSRC2Q7L4I2 434 aaKnown RBP18.2■□□□□ 0.5
MSH6-203ENST00000420813 RABEPKQ7Z6M1 372 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 CPXM2Q8N436 756 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 ENGASEQ8NFI3 743 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 CEP76Q8TAP6 659 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 BHMTQ93088 406 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 P2RY11Q96G91 374 aa18.2■□□□□ 0.5
MSH6-203ENST00000420813 ARMCX3Q9UH62 379 aaPredicted RBP18.2■□□□□ 0.5
MSH6-203ENST00000420813 ZBED1O96006 694 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 CYBBP04839 570 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 ITPKAP23677 461 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 TBXAS1P24557 533 aaPredicted RBP18.19■□□□□ 0.5
MSH6-203ENST00000420813 MFAP3P55082 362 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 ZNF33AQ06730 810 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 ST3GAL2Q16842 350 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 DUOXA1Q1HG43 343 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 GOLGA7BQ2TAP0 167 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 SGO2Q562F6 1265 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 SH3PXD2AQ5TCZ1 1133 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 FAM217AQ8IXS0 508 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 SMARCE1Q969G3 411 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 SLC35C1Q96A29 364 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 PLD4Q96BZ4 506 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 TIGD1Q96MW7 591 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 OLA1Q9NTK5 396 aaKnown RBP18.19■□□□□ 0.5
MSH6-203ENST00000420813 CACNA2D2Q9NY47 1150 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 HESX1Q9UBX0 185 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 HOOK1Q9UJC3 728 aaKnown RBP18.19■□□□□ 0.5
MSH6-203ENST00000420813 TSPAN16Q9UKR8 245 aa18.19■□□□□ 0.5
MSH6-203ENST00000420813 AGO1Q9UL18 857 aaKnown RBP18.19■□□□□ 0.5
MSH6-203ENST00000420813 HMBSP08397 361 aa18.18■□□□□ 0.5
MSH6-203ENST00000420813 ENGP17813 658 aa18.18■□□□□ 0.5
MSH6-203ENST00000420813 PMS1P54277 932 aaKnown RBP18.18■□□□□ 0.5
MSH6-203ENST00000420813 PDE4CQ08493 712 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms