RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 MAFAQ8NHW3 353 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-208ENST00000419606 SUSD6Q92537 303 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 ZFRQ96KR1 1074 aaKnown RBP13.38□□□□□ -0.27
ATG4B-208ENST00000419606 MYADMQ96S97 322 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 CNPY3Q9BT09 278 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 SMOC2Q9H3U7 446 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 TASP1Q9H6P5 420 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 PIGVQ9NUD9 493 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 SMPD4Q9NXE4 827 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 ZKSCAN5Q9Y2L8 839 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 CAPN6Q9Y6Q1 641 aa13.38□□□□□ -0.27
ATG4B-208ENST00000419606 HELZP42694 1942 aaKnown RBP13.37□□□□□ -0.27
ATG4B-208ENST00000419606 SLC12A8A0AV02 714 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 GRID2IPA4D2P6 1211 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 MYO1FO00160 1098 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 ZSCAN12O43309 604 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 MBTPS2O43462 519 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 KRT86O43790 486 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 OLFM2O95897 454 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 IGLV3-25P01717 112 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 MBL2P11226 248 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-208ENST00000419606 HDCP19113 662 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 SP100P23497 879 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-208ENST00000419606 SDC4P31431 198 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 PTPN9P43378 593 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 TUBP50607 506 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 HADHBP55084 474 aaKnown RBP13.37□□□□□ -0.27
ATG4B-208ENST00000419606 HDAC4P56524 1084 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 TFF2Q03403 129 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 EIF4EBP2Q13542 120 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-208ENST00000419606 ARHGAP29Q52LW3 1261 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 ARHGAP15Q53QZ3 475 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 ZNF276Q8N554 614 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-208ENST00000419606 RIN3Q8TB24 985 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 ADAMTS19Q8TE59 1207 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 FAM172AQ8WUF8 416 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 CENPIQ92674 756 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-208ENST00000419606 FGF13Q92913 245 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 HLA-CQ95604 372 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 RIPOR3Q96MK2 946 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 KLF16Q9BXK1 252 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-208ENST00000419606 MAGEB5Q9BZ81 275 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 TSGA10Q9BZW7 698 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 SLITRK6Q9H5Y7 841 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 FAM204AQ9H8W3 233 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 ANLNQ9NQW6 1124 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 TMPRSS4Q9NRS4 437 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 DDIT4Q9NX09 232 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 MARCH2Q9P0N8 246 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 DNMT3LQ9UJW3 386 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 CCL26Q9Y258 94 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 CPQQ9Y646 472 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 XIRP2A4UGR9 3374 aa13.37□□□□□ -0.27
ATG4B-208ENST00000419606 TRAV19A0A0A6YYK7 116 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 I6L893 689 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-208ENST00000419606 SCAMP3O14828 347 aaKnown RBP13.36□□□□□ -0.27
ATG4B-208ENST00000419606 IRAK2O43187 625 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 LRCH4O75427 683 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 PALMO75781 387 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 PROSCO94903 275 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 ENDOD1O94919 500 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 PRAMEF12O95522 483 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 CKMP06732 381 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 IRF1P10914 325 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 MTHFRP42898 656 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 KCNQ1P51787 676 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 TAS2R40P59535 323 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 TXNRD3NBQ6F5E7 133 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 FAM131BQ86XD5 332 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 CMTM8Q8IZV2 173 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 TTC16Q8NEE8 873 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 FNIP1Q8TF40 1166 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 USP13Q92995 863 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-208ENST00000419606 PEBP4Q96S96 227 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 TRIM62Q9BVG3 475 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 NACA2Q9H009 215 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 OLA1Q9NTK5 396 aaKnown RBP13.36□□□□□ -0.27
ATG4B-208ENST00000419606 IP6K2Q9UHH9 426 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 STAP1Q9ULZ2 295 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 C5orf42Q9H799 3197 aa13.36□□□□□ -0.27
ATG4B-208ENST00000419606 NUP210Q8TEM1 1887 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-208ENST00000419606 DOCK8Q8NF50 2099 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 DDX6P26196 483 aaKnown RBP eCLIP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 IL1R2P27930 398 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 TBX4P57082 545 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 SMAD4Q13485 552 aaKnown RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 PIGHQ14442 188 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 TRIP4Q15650 581 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 ZC3H12AQ5D1E8 599 aaKnown RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 FAM78AQ5JUQ0 283 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 CC2D1AQ6P1N0 951 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 SCYL2Q6P3W7 929 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 KLHDC10Q6PID8 442 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 CYP4V2Q6ZWL3 525 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-208ENST00000419606 CCDC185Q8N715 623 aa13.35□□□□□ -0.27
ATG4B-208ENST00000419606 NIPA2Q8N8Q9 360 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms