RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CFAP57Q96MR6 1250 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 ALS2CR12Q96Q35 445 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 NCAPGQ9BPX3 1015 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 LRRC3Q9BY71 257 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 SMOC2Q9H3U7 446 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 KIF9Q9HAQ2 790 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 LZTFL1Q9NQ48 299 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 SMPD4Q9NXE4 827 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 GDE1Q9NZC3 331 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 IP6K2Q9UHH9 426 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 SFMBT1Q9UHJ3 866 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 CDH7Q9ULB5 785 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 GUCA1BQ9UMX6 200 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 PPP2R2CQ9Y2T4 447 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 CPQQ9Y646 472 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 ADGRG1Q9Y653 693 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.83□□□□□ -1
TRIM48-201ENST00000417545 LAMA3Q16787 3333 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 GOLGA6L9A6NEM1 432 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 GRXCR2A6NFK2 248 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 MSI1O43347 362 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 BUB1O43683 1085 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 SPOPO43791 374 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 TRUB2O95900 331 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 MOCS2O96007 188 aaPredicted RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 OAS1P00973 400 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 ZDHHC11BP0C7U3 371 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 SLC2A3P11169 496 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 MSNP26038 577 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 RDXP35241 583 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 FLT3P36888 993 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 HARS2P49590 506 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 ZNF143P52747 638 aaPredicted RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 RPL7AP62424 266 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 PIGHQ14442 188 aaPredicted RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 HADHQ16836 314 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 ARL13BQ3SXY8 428 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 SLC25A52Q3SY17 297 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 SNX30Q5VWJ9 437 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 MSANTD2Q6P1R3 559 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 ARCQ7LC44 396 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 DAAM2Q86T65 1068 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 TAC4Q86UU9 113 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 ATP6V0D2Q8N8Y2 350 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 OLIG1Q8TAK6 271 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 FAM172AQ8WUF8 416 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 E2F7Q96AV8 911 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 PLD4Q96BZ4 506 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 RPGRIP1Q96KN7 1286 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 SLC2A13Q96QE2 648 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 CYP2S1Q96SQ9 504 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 TBCBQ99426 244 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 CNPY3Q9BT09 278 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 DDX23Q9BUQ8 820 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 PHF7Q9BWX1 381 aaPredicted RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 DCLK3Q9C098 648 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 KCNF1Q9H3M0 494 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 TDP1Q9NUW8 608 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 TMEM51Q9NW97 253 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 THG1LQ9NWX6 298 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 OSER1Q9NX31 292 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 NENFQ9UMX5 172 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 HBS1LQ9Y450 684 aaKnown RBP8.82□□□□□ -1
TRIM48-201ENST00000417545 DOCK6Q96HP0 2047 aa8.82□□□□□ -1
TRIM48-201ENST00000417545 A0A0A6YYK5 440 aaPredicted RBP8.81□□□□□ -1
TRIM48-201ENST00000417545 TYW5A2RUC4 315 aaKnown RBP8.81□□□□□ -1
TRIM48-201ENST00000417545 TMEM191CA6NGB0 347 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 C2CD4BA6NLJ0 364 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 PJA2O43164 708 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 IRAK2O43187 625 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 PRPSAP2O60256 369 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 TBX18O95935 607 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 TNNT1P13805 278 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 CCR1P32246 355 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 ARHGAP25P42331 645 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 PTPN9P43378 593 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 IFNAR2P48551 515 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 TRIP4Q15650 581 aaPredicted RBP8.81□□□□□ -1
TRIM48-201ENST00000417545 C15orf59Q2T9L4 293 aaPredicted RBP8.81□□□□□ -1
TRIM48-201ENST00000417545 SYPL2Q5VXT5 272 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 NUGGCQ68CJ6 796 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 KLHDC10Q6PID8 442 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 STRADAQ7RTN6 431 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 BHLHA9Q7RTU4 235 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 TMEM150AQ86TG1 271 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 UNC45BQ8IWX7 931 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 SYCE1Q8N0S2 351 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 ZNF276Q8N554 614 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 CELF5Q8N6W0 485 aaKnown RBP8.81□□□□□ -1
TRIM48-201ENST00000417545 SMARCD2Q92925 531 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 BTBD6Q96KE9 485 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 DDX50Q9BQ39 737 aaKnown RBP8.81□□□□□ -1
TRIM48-201ENST00000417545 SLC46A2Q9BY10 475 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 SMG9Q9H0W8 520 aaKnown RBP8.81□□□□□ -1
TRIM48-201ENST00000417545 ZFP14Q9HCL3 533 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 OSGEPQ9NPF4 335 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 TRMT1Q9NXH9 659 aaKnown RBP8.81□□□□□ -1
TRIM48-201ENST00000417545 CFAP97Q9P2B7 532 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 TMEM59LQ9UK28 342 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 TFR2Q9UP52 801 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms